1i8u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:32, 7 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1i8u.png|left|200px]]
 
-
<!--
+
==FAMILY 9 CARBOHYDRATE-BINDING MODULE FROM THERMOTOGA MARITIMA XYLANASE 10A==
-
The line below this paragraph, containing "STRUCTURE_1i8u", creates the "Structure Box" on the page.
+
<StructureSection load='1i8u' size='340' side='right'caption='[[1i8u]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1i8u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1I8U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1I8U FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
{{STRUCTURE_1i8u| PDB=1i8u | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1i8u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1i8u OCA], [https://pdbe.org/1i8u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1i8u RCSB], [https://www.ebi.ac.uk/pdbsum/1i8u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1i8u ProSAT]</span></td></tr>
-
 
+
</table>
-
===FAMILY 9 CARBOHYDRATE-BINDING MODULE FROM THERMOTOGA MARITIMA XYLANASE 10A===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/XYNA_THEMA XYNA_THEMA]
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_11371186}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 11371186 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i8/1i8u_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_11371186}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1I8U is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1I8U OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1i8u ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:11371186</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Endo-1,4-beta-xylanase]]
+
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
-
[[Category: Boraston, A B.]]
+
[[Category: Boraston AB]]
-
[[Category: Kilburn, D G.]]
+
[[Category: Kilburn DG]]
-
[[Category: Notenboom, V.]]
+
[[Category: Notenboom V]]
-
[[Category: Rose, D R.]]
+
[[Category: Rose DR]]
-
[[Category: Warren, R A.J.]]
+
[[Category: Warren RAJ]]
-
[[Category: Cbm9-2]]
+
-
[[Category: Cellulose binding domain]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 17:37:04 2009''
+

Current revision

FAMILY 9 CARBOHYDRATE-BINDING MODULE FROM THERMOTOGA MARITIMA XYLANASE 10A

PDB ID 1i8u

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools