1xov

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{{Seed}}
 
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[[Image:1xov.png|left|200px]]
 
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==The crystal structure of the listeria monocytogenes bacteriophage PSA endolysin PlyPSA==
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The line below this paragraph, containing "STRUCTURE_1xov", creates the "Structure Box" on the page.
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<StructureSection load='1xov' size='340' side='right'caption='[[1xov]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1xov]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_phage_PSA Listeria phage PSA]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XOV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XOV FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GLU:GLUTAMIC+ACID'>GLU</scene>, <scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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{{STRUCTURE_1xov| PDB=1xov | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xov FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xov OCA], [https://pdbe.org/1xov PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xov RCSB], [https://www.ebi.ac.uk/pdbsum/1xov PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xov ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q8W5Y8_9CAUD Q8W5Y8_9CAUD]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xo/1xov_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xov ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Bacteriophage murein hydrolases exhibit high specificity towards the cell walls of their host bacteria. This specificity is mostly provided by a structurally well defined cell wall-binding domain that attaches the enzyme to its solid substrate. To gain deeper insight into this mechanism we have crystallized the complete 314 amino acid endolysin from the temperate Listeria monocytogenes phage PSA. The crystal structure of PlyPSA was determined by single wavelength anomalous dispersion methods and refined to 1.8 A resolution. The two functional domains of the polypeptide, providing cell wall-binding and enzymatic activities, can be clearly distinguished and are connected via a linker segment of six amino acid residues. The core of the N-acetylmuramoyl-L-alanine amidase moiety is formed by a twisted, six-stranded beta-sheet flanked by six helices. Although the catalytic domain is unique among the known Listeria phage endolysins, its structure is highly similar to known phosphorylase/hydrolase-like alpha/beta-proteins, including an autolysin amidase from Paenibacillus polymyxa. In contrast, the C-terminal domain of PlyPSA features a novel fold, comprising two copies of a beta-barrel-like motif, which are held together by means of swapped beta-strands. The architecture of the enzyme with its two separate domains explains its unique substrate recognition properties and also provides insight into the lytic mechanisms of related Listeria phage endolysins, a class of enzymes that bear biotechnological potential.
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===The crystal structure of the listeria monocytogenes bacteriophage PSA endolysin PlyPSA===
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The crystal structure of the bacteriophage PSA endolysin reveals a unique fold responsible for specific recognition of Listeria cell walls.,Korndorfer IP, Danzer J, Schmelcher M, Zimmer M, Skerra A, Loessner MJ J Mol Biol. 2006 Dec 8;364(4):678-89. Epub 2006 Aug 30. PMID:17010991<ref>PMID:17010991</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_17010991}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 1xov" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 17010991 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_17010991}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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1XOV is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Listeria_phage_psa Listeria phage psa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XOV OCA].
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[[Category: Listeria phage PSA]]
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[[Category: Korndoerfer IP]]
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==Reference==
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[[Category: Skerra A]]
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<ref group="xtra">PMID:17010991</ref><references group="xtra"/>
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[[Category: Listeria phage psa]]
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[[Category: N-acetylmuramoyl-L-alanine amidase]]
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[[Category: Korndoerfer, I P.]]
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[[Category: Skerra, A.]]
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[[Category: Alpha/beta hydrolase]]
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[[Category: Multi-domain]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 18:05:33 2009''
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Current revision

The crystal structure of the listeria monocytogenes bacteriophage PSA endolysin PlyPSA

PDB ID 1xov

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