This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2p6u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:08, 21 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2p6u.png|left|200px]]
 
-
<!--
+
==Apo structure of the Hel308 superfamily 2 helicase==
-
The line below this paragraph, containing "STRUCTURE_2p6u", creates the "Structure Box" on the page.
+
<StructureSection load='2p6u' size='340' side='right'caption='[[2p6u]], [[Resolution|resolution]] 3.14&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2p6u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P6U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P6U FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.14&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
{{STRUCTURE_2p6u| PDB=2p6u | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p6u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p6u OCA], [https://pdbe.org/2p6u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p6u RCSB], [https://www.ebi.ac.uk/pdbsum/2p6u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p6u ProSAT]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p6/2p6u_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p6u ConSurf].
 +
<div style="clear:both"></div>
-
===Apo structure of the Hel308 superfamily 2 helicase===
+
==See Also==
-
 
+
*[[Helicase 3D structures|Helicase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_17558417}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 17558417 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_17558417}}
+
-
 
+
-
==About this Structure==
+
-
2P6U is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P6U OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:17558417</ref><references group="xtra"/>
+
[[Category: Archaeoglobus fulgidus]]
[[Category: Archaeoglobus fulgidus]]
-
[[Category: Buettner, K.]]
+
[[Category: Large Structures]]
-
[[Category: Hopfner, K P.]]
+
[[Category: Buettner K]]
-
[[Category: Nehring, S.]]
+
[[Category: Hopfner KP]]
-
[[Category: Archaeal helicase]]
+
[[Category: Nehring S]]
-
[[Category: Dna repair]]
+
-
[[Category: Sf2 helicase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 18:05:44 2009''
+

Current revision

Apo structure of the Hel308 superfamily 2 helicase

PDB ID 2p6u

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2p6u"
Personal tools