1m3e

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{{Seed}}
 
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[[Image:1m3e.png|left|200px]]
 
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==Succinyl-COA:3-ketoacid COA transferase from pig heart (selenomethionine)==
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The line below this paragraph, containing "STRUCTURE_1m3e", creates the "Structure Box" on the page.
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<StructureSection load='1m3e' size='340' side='right'caption='[[1m3e]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1m3e]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M3E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M3E FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_1m3e| PDB=1m3e | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m3e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m3e OCA], [https://pdbe.org/1m3e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m3e RCSB], [https://www.ebi.ac.uk/pdbsum/1m3e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m3e ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m3/1m3e_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m3e ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Ketoacidosis affects patients who are deficient in the enzyme activity of succinyl-CoA:3-ketoacid CoA transferase (SCOT), since SCOT catalyses the activation of acetoacetate in the metabolism of ketone bodies. Thus far, structure/function analysis of the mammalian enzyme has been predicted based on the three-dimensional structure of a CoA transferase determined from an anaerobic bacterium that utilizes its enzyme for glutamate fermentation. To better interpret clinical data, we have determined the structure of a mammalian CoA transferase from pig heart by X-ray crystallography to 2.5 A resolution. Instrumental to the structure determination were selenomethionine substitution and the use of argon during purification and crystallization. Although pig heart SCOT adopts an alpha/beta protein fold, resembling the overall fold of the bacterial CoA transferase, several loops near the active site of pig heart SCOT follow different paths than the corresponding loops in the bacterial enzyme, accounting for differences in substrate specificities. Two missense mutations found associated with SCOT of ketoacidosis patients were mapped to a location in the structure that might disrupt the stabilization of the amino-terminal strand and thereby interfere with the proper folding of the protein into a functional enzyme.
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===Succinyl-COA:3-ketoacid COA transferase from pig heart (selenomethionine)===
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Structure of the mammalian CoA transferase from pig heart.,Bateman KS, Brownie ER, Wolodko WT, Fraser ME Biochemistry. 2002 Dec 10;41(49):14455-62. PMID:12463743<ref>PMID:12463743</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_12463743}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 1m3e" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 12463743 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_12463743}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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1M3E is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M3E OCA].
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==Reference==
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<ref group="xtra">PMID:12463743</ref><references group="xtra"/>
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[[Category: 3-oxoacid CoA-transferase]]
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[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
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[[Category: Bateman, K S.]]
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[[Category: Bateman KS]]
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[[Category: Brownie, E R.]]
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[[Category: Brownie ER]]
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[[Category: Fraser, M E.]]
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[[Category: Fraser ME]]
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[[Category: Wolodko, W T.]]
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[[Category: Wolodko WT]]
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[[Category: Alpha/beta protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 18:44:08 2009''
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Current revision

Succinyl-COA:3-ketoacid COA transferase from pig heart (selenomethionine)

PDB ID 1m3e

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