1bfo

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{{Seed}}
 
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[[Image:1bfo.png|left|200px]]
 
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==CAMPATH-1G IGG2B RAT MONOCLONAL FAB==
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The line below this paragraph, containing "STRUCTURE_1bfo", creates the "Structure Box" on the page.
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<StructureSection load='1bfo' size='340' side='right'caption='[[1bfo]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1bfo]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_rattus Rattus rattus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BFO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BFO FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bfo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bfo OCA], [https://pdbe.org/1bfo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bfo RCSB], [https://www.ebi.ac.uk/pdbsum/1bfo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bfo ProSAT]</span></td></tr>
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{{STRUCTURE_1bfo| PDB=1bfo | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/KACB_RAT KACB_RAT]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bf/1bfo_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bfo ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The CAMPATH-1 family of antibodies are able systematically to lyse human lymphocytes with human complement by targeting the small cell-surface glycoprotein CD52, commonly called the CAMPATH-1 antigen. These antibodies have been used clinically for several years, providing therapy for patients with a variety of immunologically mediated diseases. We report here the first X-ray crystallographic analyses of a Fab fragment from a rat antibody, the original therapeutic monoclonal CAMPATH-1G and its humanized counterpart CAMPATH-1H, into which the six complementarity-determining regions of the rat antibody have been introduced. These structures have been refined at 2.6 A and 3.25 A resolution, respectively. The VL domains of adjacent molecules of CAMPATH-1H form a symmetric dimer within the crystals with an inter-molecular extended beta-sheet as seen in light chain dimers of the kappa class. Crystals of CAMPATH-1G have translational pseudo-symmetry. Within the antibody-combining sites, which are dominated by the protrusion of LysH52b and LysH53 from hypervariable loop H2, the charge distribution and overall integrity are highly conserved, but large changes in the position of loop H1 are observed and an altered conformation of loop H2. The major determinants of this are framework residues H71 and H24, whose identity differs in these two antibodies. These structures provide a detailed structural insight into the transplantation of an intact antibody-combining site between a rodent and a human framework, and provide an increased understanding of the specificity and antigen affinity of this pair of CAMPATH-1 antibodies for CD52. This study forms the structural basis for future modification and design of more effective antibodies to this important antigen.
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===CAMPATH-1G IGG2B RAT MONOCLONAL FAB===
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Crystal structures of a rat anti-CD52 (CAMPATH-1) therapeutic antibody Fab fragment and its humanized counterpart.,Cheetham GM, Hale G, Waldmann H, Bloomer AC J Mol Biol. 1998 Nov 20;284(1):85-99. PMID:9811544<ref>PMID:9811544</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 1bfo" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_9811544}}, adds the Publication Abstract to the page
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*[[Monoclonal Antibodies 3D structures|Monoclonal Antibodies 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 9811544 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_9811544}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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1BFO is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Rattus_rattus Rattus rattus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BFO OCA].
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==Reference==
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<ref group="xtra">PMID:9811544</ref><references group="xtra"/>
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[[Category: Rattus rattus]]
[[Category: Rattus rattus]]
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[[Category: Bloomer, A C.]]
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[[Category: Bloomer AC]]
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[[Category: Cheetham, G M.T.]]
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[[Category: Cheetham GMT]]
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[[Category: Hale, G.]]
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[[Category: Hale G]]
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[[Category: Waldmann, H.]]
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[[Category: Waldmann H]]
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[[Category: Antibody]]
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[[Category: Campath-1g]]
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[[Category: Cd52]]
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[[Category: Fab]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 19:38:22 2009''
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Current revision

CAMPATH-1G IGG2B RAT MONOCLONAL FAB

PDB ID 1bfo

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