3bm5

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{{Seed}}
 
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[[Image:3bm5.png|left|200px]]
 
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==Crystal structure of O-acetyl-serine sulfhydrylase from Entamoeba histolytica in complex with cysteine==
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The line below this paragraph, containing "STRUCTURE_3bm5", creates the "Structure Box" on the page.
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<StructureSection load='3bm5' size='340' side='right'caption='[[3bm5]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3bm5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Entamoeba_histolytica_HM-1:IMSS Entamoeba histolytica HM-1:IMSS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BM5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BM5 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYS:CYSTEINE'>CYS</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_3bm5| PDB=3bm5 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bm5 OCA], [https://pdbe.org/3bm5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bm5 RCSB], [https://www.ebi.ac.uk/pdbsum/3bm5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bm5 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/O15570_ENTHI O15570_ENTHI]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bm/3bm5_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bm5 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Cysteine plays a major role in the antioxidative defense mechanisms of the human parasite Entameoba histolytica. The major route of cysteine biosynthesis in this parasite is the condensation of O-acetylserine with sulfide by the de novo cysteine biosynthetic pathway involving two key enzymes O-acetyl-L-serine sulfhydrylase (OASS) and serine acetyl transferase (SAT). The crystal structure of native OASS from Entameoba histolytica (EhOASS) has been determined at 1.86 A resolution and in complex with its product cysteine at 2.4 A resolution. In comparison with other known OASS structures, insertion in the N-terminal region and C-terminal helix reveal critical differences, which may influence the protein-protein interactions. In spite of lacking chloride binding site at the dimeric interface, the N-terminal extension compared with other known cysteine synthases, participates in dimeric interactions in an interesting domain swapping manner, enabling it to form a stronger dimer. Sulfate is bound in the active site of the native structure, which is replaced by cysteine in the cysteine bound form causing reorientation of the small N-terminal domain and thus closure of the active site. Ligand binding constants of OAS, Cys, and Met with EhOASS are comparable with other known OASS indicating similar active site arrangement and dynamics. The cysteine complexed structure represents the snapshot of the enzyme just before releasing the final product with a closed active site. The C-terminal helix positioning in the EhOASS may effect its interactions with EhSAT and thus influencing the formation of the cysteine synthase complex in this organism. Proteins 2008. (c) 2008 Wiley-Liss, Inc.
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===Crystal structure of O-acetyl-serine sulfhydrylase from Entamoeba histolytica in complex with cysteine===
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Crystal structure of native O-acetyl-serine sulfhydrylase from Entamoeba histolytica and its complex with cysteine: Structural evidence for cysteine binding and lack of interactions with serine acetyl transferase.,Chinthalapudi K, Kumar M, Kumar S, Jain S, Alam N, Gourinath S Proteins. 2008 Mar 18;. PMID:18350570<ref>PMID:18350570</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_18350570}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 3bm5" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 18350570 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_18350570}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Entamoeba histolytica HM-1:IMSS]]
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3BM5 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Eukaryota Eukaryota]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BM5 OCA].
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[[Category: Large Structures]]
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[[Category: Gourinath S]]
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==Reference==
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[[Category: Krishna C]]
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<ref group="xtra">PMID:18350570</ref><references group="xtra"/>
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[[Category: Kumar M]]
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[[Category: Eukaryota]]
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[[Category: Kumar S]]
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[[Category: Gourinath, S.]]
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[[Category: Krishna, C.]]
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[[Category: Kumar, M.]]
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[[Category: Kumar, S.]]
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[[Category: Cys-oass complex]]
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[[Category: Cysteine synthase]]
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[[Category: Domain movement]]
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[[Category: Lyase]]
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[[Category: Lyase/biosynthetic protein complex]]
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[[Category: Pyridoxal phosphate]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 19:50:15 2009''
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Current revision

Crystal structure of O-acetyl-serine sulfhydrylase from Entamoeba histolytica in complex with cysteine

PDB ID 3bm5

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