This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1a0d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:43, 2 August 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1a0d.png|left|200px]]
 
-
<!--
+
==XYLOSE ISOMERASE FROM BACILLUS STEAROTHERMOPHILUS==
-
The line below this paragraph, containing "STRUCTURE_1a0d", creates the "Structure Box" on the page.
+
<StructureSection load='1a0d' size='340' side='right'caption='[[1a0d]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1a0d]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1A0D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1A0D FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
-
{{STRUCTURE_1a0d| PDB=1a0d | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1a0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1a0d OCA], [https://pdbe.org/1a0d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1a0d RCSB], [https://www.ebi.ac.uk/pdbsum/1a0d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1a0d ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/XYLA_GEOSE XYLA_GEOSE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a0/1a0d_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1a0d ConSurf].
 +
<div style="clear:both"></div>
-
===XYLOSE ISOMERASE FROM BACILLUS STEAROTHERMOPHILUS===
+
==See Also==
-
 
+
*[[D-xylose isomerase 3D structures|D-xylose isomerase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
1A0D is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1A0D OCA].
+
[[Category: Geobacillus stearothermophilus]]
[[Category: Geobacillus stearothermophilus]]
-
[[Category: Xylose isomerase]]
+
[[Category: Large Structures]]
-
[[Category: Blow, D.]]
+
[[Category: Blow D]]
-
[[Category: Brick, P.]]
+
[[Category: Brick P]]
-
[[Category: Chopra, R.]]
+
[[Category: Chopra R]]
-
[[Category: Conti, E.]]
+
[[Category: Conti E]]
-
[[Category: Gallay, O.]]
+
[[Category: Gallay O]]
-
[[Category: Alpha-beta barrel]]
+
-
[[Category: Glucose-fructose interconversion]]
+
-
[[Category: Hydride transfer]]
+
-
[[Category: Ketolisomerase]]
+
-
[[Category: Metalloenzyme]]
+
-
[[Category: Thermophile]]
+
-
[[Category: Xylose metabolism]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 20:36:16 2009''
+

Current revision

XYLOSE ISOMERASE FROM BACILLUS STEAROTHERMOPHILUS

PDB ID 1a0d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools