1e5b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:58, 20 March 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1e5b.png|left|200px]]
 
-
<!--
+
==Internal xylan binding domain from C. fimi Xyn10A, R262G mutant==
-
The line below this paragraph, containing "STRUCTURE_1e5b", creates the "Structure Box" on the page.
+
<StructureSection load='1e5b' size='340' side='right'caption='[[1e5b]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1e5b]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cellulomonas_fimi Cellulomonas fimi]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E5B FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e5b OCA], [https://pdbe.org/1e5b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e5b RCSB], [https://www.ebi.ac.uk/pdbsum/1e5b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e5b ProSAT]</span></td></tr>
-
{{STRUCTURE_1e5b| PDB=1e5b | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===INTERNAL XYLAN BINDING DOMAIN FROM C. FIMI XYN10A, R262G MUTANT===
+
[https://www.uniprot.org/uniprot/XYND_CELFI XYND_CELFI] Endo-acting xylanase which displays no detectable activity against polysaccharides other than xylan. Hydrolyzes glucosidic bonds with retention of anomeric configuration.
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_10973978}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 10973978 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/1e5b_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_10973978}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e5b ConSurf].
-
1E5B is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Cellulomonas_fimi Cellulomonas fimi]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5B OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:10973978</ref><references group="xtra"/>
+
[[Category: Cellulomonas fimi]]
[[Category: Cellulomonas fimi]]
-
[[Category: Endo-1,4-beta-xylanase]]
+
[[Category: Large Structures]]
-
[[Category: Bolam, D N.]]
+
[[Category: Bolam DN]]
-
[[Category: Gilbert, H J.]]
+
[[Category: Gilbert HJ]]
-
[[Category: Hefang, X.]]
+
[[Category: Hefang X]]
-
[[Category: Simpson, P J.]]
+
[[Category: Simpson PJ]]
-
[[Category: Williamson, M P.]]
+
[[Category: Williamson MP]]
-
[[Category: Beta-sheet]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Xylan binding domain]]
+
-
[[Category: Xylanase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 20:43:36 2009''
+

Current revision

Internal xylan binding domain from C. fimi Xyn10A, R262G mutant

PDB ID 1e5b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools