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2fwn
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2fwn" size="450" color="white" frame="true" align="right" spinBox="true" caption="2fwn, resolution 1.40Å" /> '''Phosphorylation of a...) |
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| - | [[Image:2fwn.jpg|left|200px]]<br /><applet load="2fwn" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2fwn, resolution 1.40Å" /> | ||
| - | '''Phosphorylation of an active site serine in a ThDP-dependent enzyme by phosphonate inactivation'''<br /> | ||
| - | == | + | ==Phosphorylation of an active site serine in a ThDP-dependent enzyme by phosphonate inactivation== |
| - | + | <StructureSection load='2fwn' size='340' side='right'caption='[[2fwn]], [[Resolution|resolution]] 1.40Å' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2fwn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_fluorescens_putidus"_flugge_1886 "bacillus fluorescens putidus" flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FWN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FWN FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TPP:THIAMINE+DIPHOSPHATE'>TPP</scene></td></tr> | ||
| + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr> | ||
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1bfd|1bfd]], [[2fn3|2fn3]]</div></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mdlC ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=303 "Bacillus fluorescens putidus" Flugge 1886])</td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Benzoylformate_decarboxylase Benzoylformate decarboxylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.7 4.1.1.7] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fwn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fwn OCA], [https://pdbe.org/2fwn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fwn RCSB], [https://www.ebi.ac.uk/pdbsum/2fwn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fwn ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fw/2fwn_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fwn ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Bacillus fluorescens putidus flugge 1886]] | ||
[[Category: Benzoylformate decarboxylase]] | [[Category: Benzoylformate decarboxylase]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | + | [[Category: Bera, A K]] | |
| - | [[Category: Bera, A | + | [[Category: Hasson, M S]] |
| - | [[Category: Hasson, M | + | [[Category: Carbon-carbon]] |
| - | [[Category: | + | [[Category: Decarboxylase]] |
| - | + | [[Category: High resolution]] | |
| - | + | [[Category: Lyase]] | |
| - | + | [[Category: Mandelate catabolism]] | |
| - | [[Category: | + | [[Category: Phophonated]] |
| - | [[Category: | + | [[Category: Thiamine diphosphate]] |
| - | [[Category: | + | |
| - | [[Category: | + | |
| - | [[Category: | + | |
| - | [[Category: | + | |
| - | + | ||
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Current revision
Phosphorylation of an active site serine in a ThDP-dependent enzyme by phosphonate inactivation
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