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Template:STRUCTURE 1puf

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Current revision

1puf, resolution 1.90Å ()

Gene:

HOXA9 (Mus musculus), PBX1 (Homo sapiens)

Structural annotation:
Resources:	CATH : 1Pufa00, 1Pufb00 InterPro : Ipr000047, Ipr001356, Ipr012287, Ipr009057, Ipr006711, Ipr005542 Pfam : PF00046 SCOP : d1pufa_, d1pufb_ UniProt : P09631, P40424

Functional annotation:
Cellular component:	nucleus cytoplasm
Biological process:	regulation of transcription, DNA-dependent multicellular organismal development transcription regulation of transcription C21-steroid hormone biosynthetic process regulation of transcriptional preinitiation complex assembly embryonic development transcription from RNA polymerase II promoter cell differentiation hindbrain development sex differentiation
Molecular function:	DNA binding protein binding transcription activator activity transcription factor activity sequence-specific DNA binding

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Explanation,
Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, RCSB, PDBsum

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1puf"

@@ Line 1: / Line 1: @@
 {{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1puf]], resolution 1.90&Aring; (<scene name='initialview01'>default scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1puf]], [[Resolution|resolution]] 1.90&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 |GENE= HOXA9 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus]), PBX1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00086 homeodomain]</span>
+|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1puf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1puf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1puf RCSB], [http://www.ebi.ac.uk/pdbsum/1puf PDBsum]</span>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1puf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1puf OCA], [http://www.ebi.ac.uk/pdbsum/1puf PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1puf RCSB]</span>
 |FUNCTION={{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0016563 | text = transcription activator activity}}{{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0043565 | text = sequence-specific DNA binding}}
 |PROCESS={{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}{{GO|id=GO:0007275 | text = multicellular organismal development}}{{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0045449 | text = regulation of transcription}}{{GO|id=GO:0006700 | text = C21-steroid hormone biosynthetic process}}{{GO|id=GO:0045898 | text = regulation of transcriptional preinitiation complex assembly}}{{GO|id=GO:0009790 | text = embryonic development}}{{GO|id=GO:0006366 | text = transcription from RNA polymerase II promoter}}{{GO|id=GO:0030154 | text = cell differentiation}}{{GO|id=GO:0030902 | text = hindbrain development}}{{GO|id=GO:0007548 | text = sex differentiation}}
 |COMPONENT={{GO|id=GO:0005634 | text = nucleus}}{{GO|id=GO:0005737 | text = cytoplasm}}
 |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pufA00 1Pufa00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pufB00 1Pufb00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000047 Ipr000047], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001356 Ipr001356], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012287 Ipr012287], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009057 Ipr009057], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006711 Ipr006711], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005542 Ipr005542]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00046 PF00046]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=95131 d1pufa_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=95132 d1pufb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P09631 P09631], [http://ca.expasy.org/cgi-bin/niceprot.pl?P40424 P40424]</span>
-|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=PBX1 PBX1]</span>
+|uPDB=1PUF|CONSURF={{!}}-
-|CONSURF={{!}}-
 {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

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