This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2fyw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2fyw" size="450" color="white" frame="true" align="right" spinBox="true" caption="2fyw, resolution 2.40&Aring;" /> '''Crystal Structure of...)
Current revision (14:38, 29 December 2021) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2fyw.gif|left|200px]]<br /><applet load="2fyw" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2fyw, resolution 2.40&Aring;" />
 
-
'''Crystal Structure of a Conserved Protein of Unknown Function from Streptococcus pneumoniae'''<br />
 
-
==About this Structure==
+
==Crystal Structure of a Conserved Protein of Unknown Function from Streptococcus pneumoniae==
-
2FYW is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae_tigr4 Streptococcus pneumoniae tigr4]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2FYW OCA].
+
<StructureSection load='2fyw' size='340' side='right'caption='[[2fyw]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
[[Category: Single protein]]
+
== Structural highlights ==
-
[[Category: Streptococcus pneumoniae tigr4]]
+
<table><tr><td colspan='2'>[[2fyw]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Strpn Strpn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FYW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FYW FirstGlance]. <br>
-
[[Category: Abdullah, J.]]
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Hatzos, C.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fyw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fyw OCA], [https://pdbe.org/2fyw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fyw RCSB], [https://www.ebi.ac.uk/pdbsum/2fyw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fyw ProSAT], [https://www.topsan.org/Proteins/MCSG/2fyw TOPSAN]</span></td></tr>
-
[[Category: Joachimiak, A.]]
+
</table>
-
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
+
== Evolutionary Conservation ==
-
[[Category: Nocek, B.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: hypothetical protein]]
+
Check<jmol>
-
[[Category: mcsg]]
+
<jmolCheckbox>
-
[[Category: midwest center for structural genomics]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fy/2fyw_consurf.spt"</scriptWhenChecked>
-
[[Category: protein structure initiative]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: psi]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: structural genomics]]
+
</jmolCheckbox>
-
 
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fyw ConSurf].
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 10:51:10 2007''
+
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Strpn]]
 +
[[Category: Abdullah, J]]
 +
[[Category: Hatzos, C]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Structural genomic]]
 +
[[Category: Nocek, B]]
 +
[[Category: Hypothetical protein]]
 +
[[Category: Mcsg]]
 +
[[Category: PSI, Protein structure initiative]]
 +
[[Category: Unknown function]]

Current revision

Crystal Structure of a Conserved Protein of Unknown Function from Streptococcus pneumoniae

PDB ID 2fyw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools