1z1z

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{{Seed}}
 
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[[Image:1z1z.png|left|200px]]
 
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==NMR structure of the gpu tail protein from lambda bacteriophage==
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The line below this paragraph, containing "STRUCTURE_1z1z", creates the "Structure Box" on the page.
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<StructureSection load='1z1z' size='340' side='right'caption='[[1z1z]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1z1z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_Lambda Escherichia virus Lambda]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z1Z FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z1z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1z OCA], [https://pdbe.org/1z1z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z1z RCSB], [https://www.ebi.ac.uk/pdbsum/1z1z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z1z ProSAT]</span></td></tr>
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{{STRUCTURE_1z1z| PDB=1z1z | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TTTP_LAMBD TTTP_LAMBD] Plays an essential role in tail assembly by capping the rapidly polymerizing tail once it has reached its requisite length and serving as the interaction surface for the completion protein.<ref>PMID:2150582</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z1/1z1z_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z1z ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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During the late stages of lambda bacteriophage assembly, the protein gpU terminates tail polymerization and participates at the interface between the mature capsid and tail components. When it engages the lambda tail, gpU undergoes a monomer-hexamer transition to achieve its biologically active form. Towards understanding how gpU participates in multiple protein-protein interactions, we have solved the structure of gpU in its monomeric state using NMR methods. The structure reveals a mixed alpha/beta motif with several dynamic loops at the periphery. Addition of 20 mM MgCl(2) is known to oligomerize gpU in the absence of its protein partners. Multiple image analysis of electron micrographs revealed ring-like structures of magnesium ion saturated gpU with a 30 A pore, consistent with its function as a portal for the passage of viral DNA into the host bacterium. The ability of magnesium ions to promote oligomerization was lost when substitutions were made at a cluster of acidic amino acids in the vicinity of helix alpha2 and the beta1-beta2 loop. Furthermore, substitutions at these sites abolished the biological activity of gpU.
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===NMR structure of the gpu tail protein from lambda bacteriophage===
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The NMR structure of the gpU tail-terminator protein from bacteriophage lambda: identification of sites contributing to Mg(II)-mediated oligomerization and biological function.,Edmonds L, Liu A, Kwan JJ, Avanessy A, Caracoglia M, Yang I, Maxwell KL, Rubenstein J, Davidson AR, Donaldson LW J Mol Biol. 2007 Jan 5;365(1):175-86. Epub 2006 Sep 29. PMID:17056065<ref>PMID:17056065</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_17056065}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 1z1z" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 17056065 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_17056065}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Escherichia virus Lambda]]
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1Z1Z is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_lambda Enterobacteria phage lambda]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1Z OCA].
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[[Category: Large Structures]]
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[[Category: Davidson A]]
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==Reference==
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[[Category: Donaldson LW]]
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<ref group="xtra">PMID:17056065</ref><references group="xtra"/>
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[[Category: Edmonds L]]
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[[Category: Enterobacteria phage lambda]]
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[[Category: Maxwell K]]
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[[Category: Davidson, A.]]
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[[Category: Donaldson, L W.]]
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[[Category: Edmonds, L.]]
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[[Category: Maxwell, K.]]
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[[Category: Bacteriophage]]
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[[Category: Mixed alpha-beta]]
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[[Category: Tail protein]]
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[[Category: Viral protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 21:47:15 2009''
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Current revision

NMR structure of the gpu tail protein from lambda bacteriophage

PDB ID 1z1z

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