1wpw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:29, 9 October 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1wpw.png|left|200px]]
 
-
<!--
+
==Crystal Structure of IPMDH from Sulfolobus tokodaii==
-
The line below this paragraph, containing "STRUCTURE_1wpw", creates the "Structure Box" on the page.
+
<StructureSection load='1wpw' size='340' side='right'caption='[[1wpw]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1wpw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii Sulfurisphaera tokodaii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WPW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WPW FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
{{STRUCTURE_1wpw| PDB=1wpw | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wpw OCA], [https://pdbe.org/1wpw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wpw RCSB], [https://www.ebi.ac.uk/pdbsum/1wpw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wpw ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LEU3_SULTO LEU3_SULTO] Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wp/1wpw_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wpw ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of IPMDH from Sulfolobus tokodaii===
+
==See Also==
-
 
+
*[[Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
1WPW is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii Sulfolobus tokodaii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WPW OCA].
+
[[Category: Large Structures]]
-
[[Category: 3-isopropylmalate dehydrogenase]]
+
[[Category: Sulfurisphaera tokodaii]]
-
[[Category: Sulfolobus tokodaii]]
+
[[Category: Hirose R]]
-
[[Category: Hirose, R.]]
+
[[Category: Moriyama H]]
-
[[Category: Moriyama, H.]]
+
[[Category: Oshima T]]
-
[[Category: Oshima, T.]]
+
[[Category: Sakurai M]]
-
[[Category: Sakurai, M.]]
+
[[Category: Sato T]]
-
[[Category: Sato, T.]]
+
[[Category: Suzuki T]]
-
[[Category: Suzuki, T.]]
+
[[Category: Tanaka N]]
-
[[Category: Tanaka, N.]]
+
[[Category: Yamagishi A]]
-
[[Category: Yamagishi, A.]]
+
-
[[Category: Oxidoreductase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 21:48:36 2009''
+

Current revision

Crystal Structure of IPMDH from Sulfolobus tokodaii

PDB ID 1wpw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools