3bng

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:42, 4 June 2025) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3bng.png|left|200px]]
 
-
<!--
+
==W. succinogenes NrfA Y218F==
-
The line below this paragraph, containing "STRUCTURE_3bng", creates the "Structure Box" on the page.
+
<StructureSection load='3bng' size='340' side='right'caption='[[3bng]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3bng]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Wolinella_succinogenes Wolinella succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BNG FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=Y1:YTTRIUM+ION'>Y1</scene></td></tr>
-
{{STRUCTURE_3bng| PDB=3bng | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bng OCA], [https://pdbe.org/3bng PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bng RCSB], [https://www.ebi.ac.uk/pdbsum/3bng PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bng ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/NRFA_WOLSU NRFA_WOLSU] Plays a role in nitrite reduction.<ref>PMID:10672190</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bn/3bng_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bng ConSurf].
 +
<div style="clear:both"></div>
-
===W. succinogenes NrfA Y218F===
+
==See Also==
-
 
+
*[[Cytochrome c nitrite reductase|Cytochrome c nitrite reductase]]
-
 
+
== References ==
-
<!--
+
<references/>
-
The line below this paragraph, {{ABSTRACT_PUBMED_18201106}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 18201106 is the PubMed ID number.
+
</StructureSection>
-
-->
+
[[Category: Large Structures]]
-
{{ABSTRACT_PUBMED_18201106}}
+
-
 
+
-
==About this Structure==
+
-
3BNG is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Wolinella_succinogenes Wolinella succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BNG OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:18201106</ref><references group="xtra"/>
+
[[Category: Wolinella succinogenes]]
[[Category: Wolinella succinogenes]]
-
[[Category: Einsle, O.]]
+
[[Category: Einsle O]]
-
[[Category: Lukat, P.]]
+
[[Category: Lukat P]]
-
[[Category: C-type cytochrome]]
+
-
[[Category: Calcium]]
+
-
[[Category: Electron transport]]
+
-
[[Category: Heme]]
+
-
[[Category: Iron]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Nitrite reductase]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Periplasm]]
+
-
[[Category: Transport]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 22:21:47 2009''
+

Current revision

W. succinogenes NrfA Y218F

PDB ID 3bng

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools