1ujc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (23:54, 27 December 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1ujc.png|left|200px]]
 
-
<!--
+
==Structure of the protein histidine phosphatase SixA complexed with tungstate==
-
The line below this paragraph, containing "STRUCTURE_1ujc", creates the "Structure Box" on the page.
+
<StructureSection load='1ujc' size='340' side='right'caption='[[1ujc]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1ujc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UJC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UJC FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=WO4:TUNGSTATE(VI)ION'>WO4</scene></td></tr>
-
{{STRUCTURE_1ujc| PDB=1ujc | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ujc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ujc OCA], [https://pdbe.org/1ujc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ujc RCSB], [https://www.ebi.ac.uk/pdbsum/1ujc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ujc ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SIXA_ECOLI SIXA_ECOLI] Exhibits phosphohistidine phosphatase activity towards the HPt domain of the ArcB sensor involved in the multistep His-Asp phosphorelay.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uj/1ujc_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ujc ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The multiple histidine-aspartate phosphorelay system plays a crucial role in cellular adaptation to environments in microorganisms and plants. Like kinase-phosphatase systems in higher eukaryotes, the multiple steps provide additional regulatory checkpoints with phosphatases. The Escherichia coli phosphatase SixA exhibits protein phosphatase activity against the histidine-containing phosphotransfer (HPt) domain located in the C-terminus of the histidine kinase ArcB engaged in anaerobic responses. We have determined the crystal structures of the free and tungstate-bound forms of SixA at 2.06 A and 1.90 A resolution, respectively. The results provide the first three-dimensional view of a bacterial protein histidine phosphatase, revealing a compact alpha/beta architecture related to a family of phosphatases containing the arginine-histidine-glycine (RHG) motif at their active sites. Compared with these RHG phosphatases, SixA lacks an extra alpha-helical subdomain as a lid over the active site, thereby forming a relatively shallow groove important for the accommodation of the HPt domain of ArcB. The tungstate ion, which mimics the substrate phosphate group, is located at the centre of the active site where the active residue, His8, points to the tungsten atom in the mode of in-line nucleophilic attack.
-
===Structure of the protein histidine phosphatase SixA complexed with tungstate===
+
Crystal structure of the protein histidine phosphatase SixA in the multistep His-Asp phosphorelay.,Hamada K, Kato M, Shimizu T, Ihara K, Mizuno T, Hakoshima T Genes Cells. 2005 Jan;10(1):1-11. PMID:15670209<ref>PMID:15670209</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<!--
+
</div>
-
The line below this paragraph, {{ABSTRACT_PUBMED_15670209}}, adds the Publication Abstract to the page
+
<div class="pdbe-citations 1ujc" style="background-color:#fffaf0;"></div>
-
(as it appears on PubMed at http://www.pubmed.gov), where 15670209 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_15670209}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
-
1UJC is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UJC OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:15670209</ref><references group="xtra"/>
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Hakoshima, T.]]
+
[[Category: Large Structures]]
-
[[Category: Hamada, K.]]
+
[[Category: Hakoshima T]]
-
[[Category: Ihara, K.]]
+
[[Category: Hamada K]]
-
[[Category: Kato, M.]]
+
[[Category: Ihara K]]
-
[[Category: Mizuno, T.]]
+
[[Category: Kato M]]
-
[[Category: Shimizu, T.]]
+
[[Category: Mizuno T]]
-
[[Category: Alpha-beta fold]]
+
[[Category: Shimizu T]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 02:20:51 2009''
+

Current revision

Structure of the protein histidine phosphatase SixA complexed with tungstate

PDB ID 1ujc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools