2nro

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:10, 28 December 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2nro.png|left|200px]]
 
-
<!--
+
==MoeA K279Q==
-
The line below this paragraph, containing "STRUCTURE_2nro", creates the "Structure Box" on the page.
+
<StructureSection load='2nro' size='340' side='right'caption='[[2nro]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2nro]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NRO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NRO FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nro FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nro OCA], [https://pdbe.org/2nro PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nro RCSB], [https://www.ebi.ac.uk/pdbsum/2nro PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nro ProSAT]</span></td></tr>
-
{{STRUCTURE_2nro| PDB=2nro | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MOEA_ECOLI MOEA_ECOLI] Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP.<ref>PMID:15632135</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nr/2nro_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nro ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The molybdenum cofactor is ubiquitous in nature, and the pathway for Moco biosynthesis is conserved in all three domains of life. Recent work has helped to illuminate one of the most enigmatic steps in Moco biosynthesis, ligation of metal to molybdopterin (the organic component of the cofactor) to form the active cofactor. In Escherichia coli, the MoeA protein mediates ligation of Mo to molybdopterin while the MogA protein enhances this process in an ATP-dependent manner. The X-ray crystal structures for both proteins have been previously described as well as two essential MogA residues, Asp49 and Asp82. Here we describe a detailed mutational analysis of the MoeA protein. Variants of conserved residues at the putative active site of MoeA were analyzed for a loss of function in two different, previously described assays, one employing moeA- crude extracts and the other utilizing a defined system. Oddly, no correlation was observed between the activity in the two assays. In fact, our results showed a general trend toward an inverse relationship between the activity in each assay. Moco binding studies indicated a strong correlation between a variant's ability to bind Moco and its activity in the purified component assay. Crystal structures of the functionally characterized MoeA variants revealed no major structural changes, indicating that the functional differences observed are not due to disruption of the protein structure. On the basis of these results, two different functional areas were assigned to regions at or near the MoeA active site cleft.
-
===MoeA K279Q===
+
Mutational analysis of Escherichia coli MoeA: two functional activities map to the active site cleft.,Nichols JD, Xiang S, Schindelin H, Rajagopalan KV Biochemistry. 2007 Jan 9;46(1):78-86. PMID:17198377<ref>PMID:17198377</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<!--
+
</div>
-
The line below this paragraph, {{ABSTRACT_PUBMED_17198377}}, adds the Publication Abstract to the page
+
<div class="pdbe-citations 2nro" style="background-color:#fffaf0;"></div>
-
(as it appears on PubMed at http://www.pubmed.gov), where 17198377 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_17198377}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
-
2NRO is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NRO OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:17198377</ref><references group="xtra"/>
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Nicolas, J.]]
+
[[Category: Large Structures]]
-
[[Category: Rajagopalan, K V.]]
+
[[Category: Nicolas J]]
-
[[Category: Schindelin, H.]]
+
[[Category: Rajagopalan KV]]
-
[[Category: Xiang, S.]]
+
[[Category: Schindelin H]]
-
[[Category: Cinnamon]]
+
[[Category: Xiang S]]
-
[[Category: Cnx1]]
+
-
[[Category: Gephyrin]]
+
-
[[Category: Moco]]
+
-
[[Category: Moea]]
+
-
[[Category: Moga]]
+
-
[[Category: Molybdenum]]
+
-
[[Category: Molybdopterin]]
+
-
[[Category: Mpt]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 02:25:49 2009''
+

Current revision

MoeA K279Q

PDB ID 2nro

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools