2gqu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2gqu" size="450" color="white" frame="true" align="right" spinBox="true" caption="2gqu, resolution 1.60&Aring;" /> '''Crystal Structure of...)
Current revision (13:52, 13 March 2024) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2gqu.jpg|left|200px]]<br /><applet load="2gqu" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2gqu, resolution 1.60&Aring;" />
 
-
'''Crystal Structure of UDP-N-Acetylenolpyruvylglucosamine Reductase (MurB) from Thermus caldophilus'''<br />
 
-
==About this Structure==
+
==Crystal Structure of UDP-N-Acetylenolpyruvylglucosamine Reductase (MurB) from Thermus caldophilus==
-
2GQU is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Thermus_caldophilus Thermus caldophilus] with FAD and EPU as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/UDP-N-acetylmuramate_dehydrogenase UDP-N-acetylmuramate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.158 1.1.1.158] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2GQU OCA].
+
<StructureSection load='2gqu' size='340' side='right'caption='[[2gqu]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==Reference==
+
<table><tr><td colspan='2'>[[2gqu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_caldophilus Thermus caldophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GQU FirstGlance]. <br>
-
Crystal structure of UDP-N-acetylenolpyruvylglucosamine reductase (MurB) from Thermus caldophilus., Kim MK, Cho MK, Song HE, Kim D, Park BH, Lee JH, Kang GB, Kim SH, Im YJ, Lee DS, Eom SH, Proteins. 2007 Feb 15;66(3):751-4. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17120230 17120230]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
[[Category: Protein complex]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPU:URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL)+BUTYRIC+ACID'>EPU</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gqu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqu OCA], [https://pdbe.org/2gqu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gqu RCSB], [https://www.ebi.ac.uk/pdbsum/2gqu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gqu ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MURB_THET8 MURB_THET8] Cell wall formation.[HAMAP-Rule:MF_00037]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/2gqu_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gqu ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Thermus caldophilus]]
[[Category: Thermus caldophilus]]
-
[[Category: UDP-N-acetylmuramate dehydrogenase]]
+
[[Category: Eom SH]]
-
[[Category: Eom, S.H.]]
+
[[Category: Kim M-K]]
-
[[Category: Kim, M.K.]]
+
-
[[Category: EPU]]
+
-
[[Category: FAD]]
+
-
[[Category: enolpyruvyl-udp-n-acetylglucosamine]]
+
-
[[Category: enzyme]]
+
-
[[Category: flavin adenine dinucleotide]]
+
-
[[Category: peptidoglycan biosynthesis]]
+
-
[[Category: substrate complex]]
+
-
 
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 11:21:04 2007''
+

Current revision

Crystal Structure of UDP-N-Acetylenolpyruvylglucosamine Reductase (MurB) from Thermus caldophilus

PDB ID 2gqu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2gqu"
Personal tools