This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1qwj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:18, 14 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1qwj.png|left|200px]]
 
-
<!--
+
==The Crystal Structure of Murine CMP-5-N-Acetylneuraminic Acid Synthetase==
-
The line below this paragraph, containing "STRUCTURE_1qwj", creates the "Structure Box" on the page.
+
<StructureSection load='1qwj' size='340' side='right'caption='[[1qwj]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1qwj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QWJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QWJ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NCC:CYTIDINE-5-MONOPHOSPHATE-5-N-ACETYLNEURAMINIC+ACID'>NCC</scene></td></tr>
-
{{STRUCTURE_1qwj| PDB=1qwj | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qwj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qwj OCA], [https://pdbe.org/1qwj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qwj RCSB], [https://www.ebi.ac.uk/pdbsum/1qwj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qwj ProSAT]</span></td></tr>
-
 
+
</table>
-
===The Crystal Structure of Murine CMP-5-N-Acetylneuraminic Acid Synthetase===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/NEUA_MOUSE NEUA_MOUSE] Catalyzes the activation of N-acetylneuraminic acid (NeuNAc) to cytidine 5'-monophosphate N-acetylneuraminic acid (CMP-NeuNAc), a substrate required for the addition of sialic acid. Has some activity toward NeuNAc, N-glycolylneuraminic acid (Neu5Gc) or 2-keto-3-deoxy-D-glycero-D-galacto-nononic acid (KDN).<ref>PMID:9689047</ref>
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_14636592}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 14636592 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qw/1qwj_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_14636592}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1QWJ is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QWJ OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1qwj ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
== References ==
-
<ref group="xtra">PMID:14636592</ref><references group="xtra"/>
+
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: N-acylneuraminate cytidylyltransferase]]
+
[[Category: Gerardy-Schahn R]]
-
[[Category: Gerardy-Schahn, R.]]
+
[[Category: Huber R]]
-
[[Category: Huber, R.]]
+
[[Category: Jacob U]]
-
[[Category: Jacob, U.]]
+
[[Category: Kaiser JT]]
-
[[Category: Kaiser, J T.]]
+
[[Category: Krapp S]]
-
[[Category: Krapp, S.]]
+
[[Category: Muenster-Kuehnel AK]]
-
[[Category: Muenster-Kuehnel, A K.]]
+
[[Category: Tiralongo J]]
-
[[Category: Tiralongo, J.]]
+
-
[[Category: Cmp-5-n-acetylneuraminic acid synthetase]]
+
-
[[Category: Cmp-neu5ac]]
+
-
[[Category: Glycosylation]]
+
-
[[Category: Lipopolysaccharide biosynthesis]]
+
-
[[Category: Sialic acid]]
+
-
[[Category: Sugar-activating enzyme]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 04:07:51 2009''
+

Current revision

The Crystal Structure of Murine CMP-5-N-Acetylneuraminic Acid Synthetase

PDB ID 1qwj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools