1gku

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:22, 27 March 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1gku.png|left|200px]]
 
-
<!--
+
==Reverse gyrase from Archaeoglobus fulgidus==
-
The line below this paragraph, containing "STRUCTURE_1gku", creates the "Structure Box" on the page.
+
<StructureSection load='1gku' size='340' side='right'caption='[[1gku]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1gku]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GKU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GKU FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gku FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gku OCA], [https://pdbe.org/1gku PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gku RCSB], [https://www.ebi.ac.uk/pdbsum/1gku PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gku ProSAT]</span></td></tr>
-
{{STRUCTURE_1gku| PDB=1gku | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RGYR_ARCFU RGYR_ARCFU] Modifies the topological state of DNA by introducing positive supercoils in an ATP-dependent process. It cleaves transiently a single DNA strand and remains covalently bound to the 5' DNA end through a tyrosine residue. May be involved in rewinding the DNA strands in the regions of the chromosome that have opened up to allow transcription or replication.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/1gku_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gku ConSurf].
 +
<div style="clear:both"></div>
-
===REVERSE GYRASE FROM ARCHAEOGLOBUS FULGIDUS===
+
==See Also==
-
 
+
*[[Gyrase 3D Structures|Gyrase 3D Structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_11823434}}, adds the Publication Abstract to the page
+
[[Category: Archaeoglobus fulgidus DSM 4304]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 11823434 is the PubMed ID number.
+
[[Category: Large Structures]]
-
-->
+
[[Category: Rodriguez AC]]
-
{{ABSTRACT_PUBMED_11823434}}
+
[[Category: Stock D]]
-
 
+
-
==About this Structure==
+
-
1GKU is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GKU OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:11823434</ref><references group="xtra"/>
+
-
[[Category: Archaeoglobus fulgidus]]
+
-
[[Category: Rodriguez, A C.]]
+
-
[[Category: Stock, D.]]
+
-
[[Category: Archaea]]
+
-
[[Category: Dna supercoiling]]
+
-
[[Category: Helicase]]
+
-
[[Category: Topoisomerase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 04:35:06 2009''
+

Current revision

Reverse gyrase from Archaeoglobus fulgidus

PDB ID 1gku

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1gku"
Personal tools