1jh3

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{{Seed}}
 
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[[Image:1jh3.png|left|200px]]
 
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==Solution structure of tyrosyl-tRNA synthetase C-terminal domain.==
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The line below this paragraph, containing "STRUCTURE_1jh3", creates the "Structure Box" on the page.
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<StructureSection load='1jh3' size='340' side='right'caption='[[1jh3]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1jh3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JH3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JH3 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jh3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jh3 OCA], [https://pdbe.org/1jh3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jh3 RCSB], [https://www.ebi.ac.uk/pdbsum/1jh3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jh3 ProSAT]</span></td></tr>
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{{STRUCTURE_1jh3| PDB=1jh3 | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SYY_GEOSE SYY_GEOSE] Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jh/1jh3_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jh3 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The structure of a recombinant protein, TyrRS(delta4), corresponding to the anticodon arm binding domain of Bacillus stearothermophilus tyrosyl-tRNA synthetase, has been solved, and its dynamics have been studied by nuclear magnetic resonance (NMR). It is the first structure described for such a domain of a tyrosyl-tRNA synthetase. It consists of a five-stranded beta sheet, packed against two alpha helices on one side and one alpha helix on the other side. A large part of the domain is structurally similar to other functionally unrelated RNA binding proteins. The basic residues known to be essential for tRNA binding and charging are exposed to the solvent on the same face of the molecule. The structure of TyrRS(delta4), together with previous mutagenesis data, allows one to delineate the region of interaction with tRNATyr.
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===Solution structure of tyrosyl-tRNA synthetase C-terminal domain.===
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Structure and dynamics of the anticodon arm binding domain of Bacillus stearothermophilus Tyrosyl-tRNA synthetase.,Guijarro JI, Pintar A, Prochnicka-Chalufour A, Guez V, Gilquin B, Bedouelle H, Delepierre M Structure. 2002 Mar;10(3):311-7. PMID:12005430<ref>PMID:12005430</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 1jh3" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_12005430}}, adds the Publication Abstract to the page
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*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 12005430 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_12005430}}
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__TOC__
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</StructureSection>
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==About this Structure==
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1JH3 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JH3 OCA].
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==Reference==
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<ref group="xtra">PMID:12005430</ref><references group="xtra"/>
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[[Category: Geobacillus stearothermophilus]]
[[Category: Geobacillus stearothermophilus]]
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[[Category: Tyrosine--tRNA ligase]]
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[[Category: Large Structures]]
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[[Category: Bedouelle, H.]]
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[[Category: Bedouelle H]]
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[[Category: Delepierre, M.]]
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[[Category: Delepierre M]]
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[[Category: Gilquin, B.]]
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[[Category: Gilquin B]]
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[[Category: Guez, V.]]
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[[Category: Guez V]]
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[[Category: Guijarro, J I.]]
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[[Category: Guijarro JI]]
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[[Category: Pintar, A.]]
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[[Category: Pintar A]]
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[[Category: Prochnicka-Chalufour, A.]]
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[[Category: Prochnicka-Chalufour A]]
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[[Category: Aminoacyl-trna synthetase]]
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[[Category: Anticodon-arm binding domain]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 04:46:44 2009''
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Current revision

Solution structure of tyrosyl-tRNA synthetase C-terminal domain.

PDB ID 1jh3

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