2rks

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:23, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2rks.png|left|200px]]
 
-
<!--
+
==Crystal structure of Staphylococcal nuclease variant PHS L38K at cryogenic temperature==
-
The line below this paragraph, containing "STRUCTURE_2rks", creates the "Structure Box" on the page.
+
<StructureSection load='2rks' size='340' side='right'caption='[[2rks]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2rks]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RKS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RKS FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.01&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
{{STRUCTURE_2rks| PDB=2rks | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rks FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rks OCA], [https://pdbe.org/2rks PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rks RCSB], [https://www.ebi.ac.uk/pdbsum/2rks PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rks ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rk/2rks_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rks ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of Staphylococcal nuclease variant PHS L38K at cryogenic temperature===
+
==See Also==
-
 
+
*[[Staphylococcal nuclease 3D structures|Staphylococcal nuclease 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_18369193}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 18369193 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_18369193}}
+
-
 
+
-
==About this Structure==
+
-
2RKS is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RKS OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:18369193</ref><references group="xtra"/>
+
-
[[Category: Micrococcal nuclease]]
+
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
-
[[Category: Garcia-Moreno, E B.]]
+
[[Category: Garcia-Moreno EB]]
-
[[Category: Harms, M J.]]
+
[[Category: Harms MJ]]
-
[[Category: Schlessman, J L.]]
+
[[Category: Schlessman JL]]
-
[[Category: Hydrolase]]
+
-
[[Category: Hyperstable variant]]
+
-
[[Category: Internal ion pair]]
+
-
[[Category: Staphylococcal nuclease]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 05:11:02 2009''
+

Current revision

Crystal structure of Staphylococcal nuclease variant PHS L38K at cryogenic temperature

PDB ID 2rks

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2rks"
Personal tools