1jcx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:38, 7 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1jcx.png|left|200px]]
 
-
<!--
+
==Aquifex aeolicus KDO8P synthase in complex with API and Cadmium==
-
The line below this paragraph, containing "STRUCTURE_1jcx", creates the "Structure Box" on the page.
+
<StructureSection load='1jcx' size='340' side='right'caption='[[1jcx]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1jcx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JCX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JCX FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=PAI:{[(2,2-DIHYDROXY-ETHYL)-(2,3,4,5-TETRAHYDROXY-6-PHOSPHONOOXY-HEXYL)-AMINO]-METHYL}-PHOSPHONIC+ACID'>PAI</scene></td></tr>
-
{{STRUCTURE_1jcx| PDB=1jcx | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jcx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jcx OCA], [https://pdbe.org/1jcx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jcx RCSB], [https://www.ebi.ac.uk/pdbsum/1jcx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jcx ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/KDSA_AQUAE KDSA_AQUAE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jc/1jcx_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jcx ConSurf].
 +
<div style="clear:both"></div>
-
===Aquifex aeolicus KDO8P synthase in complex with API and Cadmium===
+
==See Also==
-
 
+
*[[Kdo-8-phosphate synthase|Kdo-8-phosphate synthase]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_11747443}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 11747443 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_11747443}}
+
-
 
+
-
==About this Structure==
+
-
1JCX is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JCX OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:11747443</ref><references group="xtra"/>
+
-
[[Category: 3-deoxy-8-phosphooctulonate synthase]]
+
[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
-
[[Category: Duewel, H S.]]
+
[[Category: Large Structures]]
-
[[Category: Gatti, D L.]]
+
[[Category: Duewel HS]]
-
[[Category: Wang, J.]]
+
[[Category: Gatti DL]]
-
[[Category: Woodard, R W.]]
+
[[Category: Wang J]]
-
[[Category: Api]]
+
[[Category: Woodard RW]]
-
[[Category: Beta/alpha barrel]]
+
-
[[Category: Kdo]]
+
-
[[Category: Kdo8p]]
+
-
[[Category: Kdo8p]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 05:50:39 2009''
+

Current revision

Aquifex aeolicus KDO8P synthase in complex with API and Cadmium

PDB ID 1jcx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1jcx"
Personal tools