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1q5v

From Proteopedia

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{{Seed}}
 
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[[Image:1q5v.png|left|200px]]
 
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<!--
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==Apo-NikR==
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The line below this paragraph, containing "STRUCTURE_1q5v", creates the "Structure Box" on the page.
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<StructureSection load='1q5v' size='340' side='right'caption='[[1q5v]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1q5v]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q5V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q5V FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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-->
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q5v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q5v OCA], [https://pdbe.org/1q5v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q5v RCSB], [https://www.ebi.ac.uk/pdbsum/1q5v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q5v ProSAT]</span></td></tr>
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{{STRUCTURE_1q5v| PDB=1q5v | SCENE= }}
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</table>
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== Function ==
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===Apo-NikR===
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[https://www.uniprot.org/uniprot/NIKR_ECOLI NIKR_ECOLI] Transcriptional repressor of the nikABCDE operon. Is active in the presence of excessive concentrations of intracellular nickel.[HAMAP-Rule:MF_00476]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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<!--
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Check<jmol>
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The line below this paragraph, {{ABSTRACT_PUBMED_12970756}}, adds the Publication Abstract to the page
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<jmolCheckbox>
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(as it appears on PubMed at http://www.pubmed.gov), where 12970756 is the PubMed ID number.
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q5/1q5v_consurf.spt"</scriptWhenChecked>
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-->
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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{{ABSTRACT_PUBMED_12970756}}
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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==About this Structure==
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q5v ConSurf].
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1Q5V is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q5V OCA].
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<div style="clear:both"></div>
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__TOC__
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==Reference==
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</StructureSection>
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<ref group="xtra">PMID:12970756</ref><references group="xtra"/>
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[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: Chivers, P T.]]
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[[Category: Large Structures]]
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[[Category: Drennan, C L.]]
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[[Category: Chivers PT]]
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[[Category: Guo, Y.]]
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[[Category: Drennan CL]]
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[[Category: Sauer, R T.]]
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[[Category: Guo Y]]
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[[Category: Schreiter, E R.]]
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[[Category: Sauer RT]]
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[[Category: Sintchak, M D.]]
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[[Category: Schreiter ER]]
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[[Category: Beta sandwich]]
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[[Category: Sintchak MD]]
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[[Category: Homotetramer]]
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[[Category: Ribbon-helix-helix domain]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 05:55:41 2009''
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Current revision

Apo-NikR

PDB ID 1q5v

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