This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2ha9
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2ha9" size="450" color="white" frame="true" align="right" spinBox="true" caption="2ha9, resolution 2.70Å" /> '''Crystal structure of...) |
|||
| (14 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2ha9.gif|left|200px]]<br /><applet load="2ha9" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2ha9, resolution 2.70Å" /> | ||
| - | '''Crystal structure of protein SP0239 from Streptococcus pneumoniae'''<br /> | ||
| - | == | + | ==Crystal structure of protein SP0239 from Streptococcus pneumoniae== |
| - | + | <StructureSection load='2ha9' size='340' side='right'caption='[[2ha9]], [[Resolution|resolution]] 2.70Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| + | <table><tr><td colspan='2'>[[2ha9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"diplococcus_pneumoniae"_(klein_1884)_weichselbaum_1886 "diplococcus pneumoniae" (klein 1884) weichselbaum 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HA9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HA9 FirstGlance]. <br> | ||
| + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ha9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ha9 OCA], [https://pdbe.org/2ha9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ha9 RCSB], [https://www.ebi.ac.uk/pdbsum/2ha9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ha9 ProSAT], [https://www.topsan.org/Proteins/MCSG/2ha9 TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ha/2ha9_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ha9 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Abdullah, J]] | ||
| + | [[Category: Chang, C]] | ||
| + | [[Category: Hatzos, C]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
[[Category: Streptococcus pneumoniae]] | [[Category: Streptococcus pneumoniae]] | ||
| - | [[Category: | + | [[Category: Unknown function]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of protein SP0239 from Streptococcus pneumoniae
| |||||||||||

