This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qht

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:54, 13 March 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2qht.png|left|200px]]
 
-
<!--
+
==Structural Basis of Octanoic Acid Recognition by Lipoate-Protein Ligase B==
-
The line below this paragraph, containing "STRUCTURE_2qht", creates the "Structure Box" on the page.
+
<StructureSection load='2qht' size='340' side='right'caption='[[2qht]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2qht]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QHT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QHT FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qht FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qht OCA], [https://pdbe.org/2qht PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qht RCSB], [https://www.ebi.ac.uk/pdbsum/2qht PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qht ProSAT]</span></td></tr>
-
{{STRUCTURE_2qht| PDB=2qht | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Structural Basis of Octanoic Acid Recognition by Lipoate-Protein Ligase B===
+
[https://www.uniprot.org/uniprot/LIPB_THET8 LIPB_THET8] Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate (By similarity).
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2QHT is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QHT OCA].
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qh/2qht_consurf.spt"</scriptWhenChecked>
-
==Reference==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
<ref group="xtra">PMID:18076036</ref><references group="xtra"/>
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Thermus thermophilus]]
+
</jmolCheckbox>
-
[[Category: Kim, D J.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qht ConSurf].
-
[[Category: Kim, H S.]]
+
<div style="clear:both"></div>
-
[[Category: Kim, K H.]]
+
__TOC__
-
[[Category: Lee, H H.]]
+
</StructureSection>
-
[[Category: Lee, S J.]]
+
[[Category: Large Structures]]
-
[[Category: Suh, S W.]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Yoon, H J.]]
+
[[Category: Kim DJ]]
-
[[Category: Globular protein]]
+
[[Category: Kim HS]]
-
[[Category: Transferase]]
+
[[Category: Kim KH]]
-
 
+
[[Category: Lee HH]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 06:36:02 2009''
+
[[Category: Lee SJ]]
 +
[[Category: Suh SW]]
 +
[[Category: Yoon HJ]]

Current revision

Structural Basis of Octanoic Acid Recognition by Lipoate-Protein Ligase B

PDB ID 2qht

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qht"
Personal tools