This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2hfd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2hfd" size="450" color="white" frame="true" align="right" spinBox="true" caption="2hfd" /> '''NMR structure of protein Hydrogenase-1 opero...)
Current revision (06:40, 1 May 2024) (edit) (undo)
 
(18 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2hfd.gif|left|200px]]<br /><applet load="2hfd" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2hfd" />
 
-
'''NMR structure of protein Hydrogenase-1 operon protein hyaE from Escherichia coli: Northeast Structural Genomics Consortium Target ER415'''<br />
 
-
==About this Structure==
+
==NMR structure of protein Hydrogenase-1 operon protein hyaE from Escherichia coli: Northeast Structural Genomics Consortium Target ER415==
-
2HFD is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2HFD OCA].
+
<StructureSection load='2hfd' size='340' side='right'caption='[[2hfd]]' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2hfd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HFD FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hfd OCA], [https://pdbe.org/2hfd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hfd RCSB], [https://www.ebi.ac.uk/pdbsum/2hfd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hfd ProSAT], [https://www.topsan.org/Proteins/NESGC/2hfd TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/HYAE_ECOLI HYAE_ECOLI] Not known. Could form, along with HyaD, a complex involved in the processing of the hydrogenase 1 structural operon.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hf/2hfd_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hfd ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Acton, T.B.]]
+
[[Category: Acton T]]
-
[[Category: Atreya, H.S.]]
+
[[Category: Atreya HS]]
-
[[Category: Baran, M.]]
+
[[Category: Baran M]]
-
[[Category: Cunningham, K.]]
+
[[Category: Cunningham K]]
-
[[Category: Eletsky, A.]]
+
[[Category: Eletsky A]]
-
[[Category: Janjua, H.]]
+
[[Category: Janjua H]]
-
[[Category: Liu, G.]]
+
[[Category: Liu G]]
-
[[Category: Liu, J.]]
+
[[Category: Liu J]]
-
[[Category: Ma, L.C.]]
+
[[Category: Ma LC]]
-
[[Category: Montelione, G.T.]]
+
[[Category: Montelione GT]]
-
[[Category: NESG, Northeast.Structural.Genomics.Consortium.]]
+
[[Category: Parish D]]
-
[[Category: Parish, D.]]
+
[[Category: Rost B]]
-
[[Category: Rost, B.]]
+
[[Category: Singarapu KK]]
-
[[Category: Singarapu, K.K.]]
+
[[Category: Swapna GVT]]
-
[[Category: Swapna, G.V.T.]]
+
[[Category: Szyperski T]]
-
[[Category: Szyperski, T.]]
+
[[Category: Xiao R]]
-
[[Category: Xiao, R]]
+
[[Category: Xu D]]
-
[[Category: Xu, D.]]
+
-
[[Category: alfa-beta]]
+
-
[[Category: nesgc]]
+
-
[[Category: northeast structural genomics consortium]]
+
-
[[Category: protein structure]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: structural genomics]]
+
-
 
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 11:42:58 2007''
+

Current revision

NMR structure of protein Hydrogenase-1 operon protein hyaE from Escherichia coli: Northeast Structural Genomics Consortium Target ER415

PDB ID 2hfd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools