1pjz

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{{Seed}}
 
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[[Image:1pjz.png|left|200px]]
 
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==Solution structure of thiopurine methyltransferase from Pseudomonas syringae==
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The line below this paragraph, containing "STRUCTURE_1pjz", creates the "Structure Box" on the page.
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<StructureSection load='1pjz' size='340' side='right'caption='[[1pjz]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1pjz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._pisi Pseudomonas syringae pv. pisi]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PJZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PJZ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pjz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pjz OCA], [https://pdbe.org/1pjz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pjz RCSB], [https://www.ebi.ac.uk/pdbsum/1pjz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pjz ProSAT]</span></td></tr>
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{{STRUCTURE_1pjz| PDB=1pjz | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TPMT_PSESJ TPMT_PSESJ] Involved in the biological cycling of tellurium and selenium. Tellurium resistance (Ter) mechanism.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pj/1pjz_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pjz ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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In humans, the enzyme thiopurine methyltransferase (TPMT) metabolizes 6-thiopurine (6-TP) medications, including 6-thioguanine, 6-mercaptopurine and azathioprine, commonly used for immune suppression and for the treatment of hematopoietic malignancies. S-Methylation by TPMT prevents the intracellular conversion of these drugs into active 6-thioguanine nucleotides (6-TGNs). Genetic polymorphisms in the TPMT protein sequence have been associated with decreased tissue enzymatic activities and an increased risk of life-threatening myelo-suppression from standard doses of 6-TP medications. Biochemical studies have demonstrated that TPMT deficiency is primarily associated with increased degradation of the polymorphic proteins through an ubiquitylation and proteasomal-dependent pathway. We have now determined the tertiary structure of the bacterial orthologue of TPMT from Pseudomonas syringae using NMR spectroscopy. Bacterial TPMT similarly catalyzes the S-adenosylmethionine (SAM)-dependent transmethylation of 6-TPs and shares 45% similarity (33% identity) with the human enzyme. Initial studies revealed an unstructured N terminus, which was removed for structural studies and subsequently determined to be required for enzymatic activity. Despite lacking sequence similarity to any protein of known three-dimensional structure, the tertiary structure of bacterial TPMT reveals a classical SAM-dependent methyltransferase topology, consisting of a seven-stranded beta-sheet flanked by alpha-helices on both sides. However, some deviations from the consensus topology, along with multiple insertions of structural elements, are evident. A review of the many experimentally determined tertiary structures of SAM-dependent methyltransferases demonstrates that such structural deviations from the consensus topology are common and often functionally important.
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===Solution structure of thiopurine methyltransferase from Pseudomonas syringae===
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Tertiary structure of thiopurine methyltransferase from Pseudomonas syringae, a bacterial orthologue of a polymorphic, drug-metabolizing enzyme.,Scheuermann TH, Lolis E, Hodsdon ME J Mol Biol. 2003 Oct 24;333(3):573-85. PMID:14556746<ref>PMID:14556746</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_14556746}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 1pjz" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 14556746 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_14556746}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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1PJZ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._pisi Pseudomonas syringae pv. pisi]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PJZ OCA].
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==Reference==
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<ref group="xtra">PMID:14556746</ref><references group="xtra"/>
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[[Category: Pseudomonas syringae pv. pisi]]
[[Category: Pseudomonas syringae pv. pisi]]
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[[Category: Thiopurine S-methyltransferase]]
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[[Category: Hodsdon ME]]
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[[Category: Hodsdon, M E.]]
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[[Category: Lolis E]]
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[[Category: Lolis, E.]]
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[[Category: Scheuermann TH]]
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[[Category: Scheuermann, T H.]]
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[[Category: Drug metabolism]]
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[[Category: Methyltransferase]]
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[[Category: Polymorphism]]
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[[Category: S-adenosylmethionine]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 08:57:22 2009''
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Current revision

Solution structure of thiopurine methyltransferase from Pseudomonas syringae

PDB ID 1pjz

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