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3e8k

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{{Seed}}
 
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[[Image:3e8k.jpg|left|200px]]
 
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==Crystal structure of HK97 Prohead II==
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The line below this paragraph, containing "STRUCTURE_3e8k", creates the "Structure Box" on the page.
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<SX load='3e8k' size='340' side='right' viewer='molstar' caption='[[3e8k]], [[Resolution|resolution]] 3.65&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3e8k]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_HK97 Escherichia virus HK97]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E8K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E8K FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.65&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e8k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e8k OCA], [https://pdbe.org/3e8k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e8k RCSB], [https://www.ebi.ac.uk/pdbsum/3e8k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e8k ProSAT]</span></td></tr>
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{{STRUCTURE_3e8k| PDB=3e8k | SCENE= }}
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</table>
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== Function ==
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===Crystal structure of HK97 Prohead II===
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[https://www.uniprot.org/uniprot/CAPSD_BPHK7 CAPSD_BPHK7] Assembles to form an icosahedral capsid of 66 nm, with a T=7 laevo symmetry (PubMed:11000116, PubMed:21276801). Responsible for its self-assembly into a procapsid. The phage does not need to encode a separate scaffolfing protein because its capsid protein contains the delta domain that carries that function.<ref>PMID:11000116</ref> <ref>PMID:21276801</ref> <ref>PMID:7669350</ref> <ref>PMID:7723020</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==About this Structure==
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Check<jmol>
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3E8K is a 7 chains structure of sequences from [http://en.wikipedia.org/wiki/Enterobacteria_phage_hk97 Enterobacteria phage hk97]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E8K OCA].
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<jmolCheckbox>
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[[Category: Enterobacteria phage hk97]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e8/3e8k_consurf.spt"</scriptWhenChecked>
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[[Category: Gertsman, I.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Johnson, J E.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Speir, J.]]
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</jmolCheckbox>
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[[Category: Capsid protein]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e8k ConSurf].
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[[Category: Hk97 capsid fold]]
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<div style="clear:both"></div>
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[[Category: Virion]]
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== References ==
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[[Category: Virus]]
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<references/>
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__TOC__
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 09:23:34 2009''
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</SX>
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[[Category: Escherichia virus HK97]]
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[[Category: Large Structures]]
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[[Category: Gertsman I]]
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[[Category: Johnson JE]]
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[[Category: Speir J]]

Current revision

Crystal structure of HK97 Prohead II

3e8k, resolution 3.65Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

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