This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3g1c

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:51, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3g1c.jpg|left|200px]]
 
-
<!--
+
==The crystal structure of a TrpR like protein from Eubacterium eligens ATCC 27750==
-
The line below this paragraph, containing "STRUCTURE_3g1c", creates the "Structure Box" on the page.
+
<StructureSection load='3g1c' size='340' side='right'caption='[[3g1c]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3g1c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Eubacterium_eligens_ATCC_27750 Eubacterium eligens ATCC 27750]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G1C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3G1C FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
{{STRUCTURE_3g1c| PDB=3g1c | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3g1c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g1c OCA], [https://pdbe.org/3g1c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3g1c RCSB], [https://www.ebi.ac.uk/pdbsum/3g1c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3g1c ProSAT], [https://www.topsan.org/Proteins/MCSG/3g1c TOPSAN]</span></td></tr>
-
 
+
</table>
-
===The crystal structure of a TrpR like protein from Eubacterium eligens ATCC 27750===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/C4Z2H9_LACE2 C4Z2H9_LACE2]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3G1C is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Eubacterium_eligens_atcc_27750 Eubacterium eligens atcc 27750]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G1C OCA].
+
Check<jmol>
-
[[Category: Eubacterium eligens atcc 27750]]
+
<jmolCheckbox>
-
[[Category: Babnigg, G.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g1/3g1c_consurf.spt"</scriptWhenChecked>
-
[[Category: Freeman, L.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Hendricks, R.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Joachimiak, A.]]
+
</jmolCheckbox>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3g1c ConSurf].
-
[[Category: Zhang, R.]]
+
<div style="clear:both"></div>
-
[[Category: Dna binding protein]]
+
__TOC__
-
[[Category: Eubacterium eligen]]
+
</StructureSection>
-
[[Category: Mcsg]]
+
[[Category: Large Structures]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Babnigg G]]
-
[[Category: Protein structure initiative]]
+
[[Category: Freeman L]]
-
[[Category: Psi]]
+
[[Category: Hendricks R]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Transcription]]
+
[[Category: Zhang R]]
-
[[Category: Trpr like protein]]
+
-
[[Category: Unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 09:28:14 2009''
+

Current revision

The crystal structure of a TrpR like protein from Eubacterium eligens ATCC 27750

PDB ID 3g1c

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools