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1jsd

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{{Seed}}
 
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[[Image:1jsd.png|left|200px]]
 
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==CRYSTAL STRUCTURE OF SWINE H9 HAEMAGGLUTININ==
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The line below this paragraph, containing "STRUCTURE_1jsd", creates the "Structure Box" on the page.
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<StructureSection load='1jsd' size='340' side='right'caption='[[1jsd]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1jsd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Influenza_A_virus_(A/swine/Hong_Kong/9/98(H9N2)) Influenza A virus (A/swine/Hong Kong/9/98(H9N2))]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JSD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JSD FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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{{STRUCTURE_1jsd| PDB=1jsd | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jsd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jsd OCA], [https://pdbe.org/1jsd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jsd RCSB], [https://www.ebi.ac.uk/pdbsum/1jsd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jsd ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q91CD4_9INFA Q91CD4_9INFA] Binds to sialic acid-containing receptors on the cell surface, bringing about the attachment of the virus particle to the cell. This attachment induces virion internalization of about two third of the virus particles through clathrin-dependent endocytosis and about one third through a clathrin- and caveolin-independent pathway. Plays a major role in the determination of host range restriction and virulence. Class I viral fusion protein. Responsible for penetration of the virus into the cell cytoplasm by mediating the fusion of the membrane of the endocytosed virus particle with the endosomal membrane. Low pH in endosomes induces an irreversible conformational change in HA2, releasing the fusion hydrophobic peptide. Several trimers are required to form a competent fusion pore (By similarity).[RuleBase:RU003324][SAAS:SAAS013828_004_327643]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/js/1jsd_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jsd ConSurf].
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<div style="clear:both"></div>
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===CRYSTAL STRUCTURE OF SWINE H9 HAEMAGGLUTININ===
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==See Also==
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*[[Hemagglutinin 3D structures|Hemagglutinin 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_11867515}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 11867515 is the PubMed ID number.
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[[Category: Ha Y]]
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-->
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[[Category: Skehel JJ]]
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{{ABSTRACT_PUBMED_11867515}}
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[[Category: Steven DJ]]
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[[Category: Wiley DC]]
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==About this Structure==
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1JSD is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Influenza_a_virus Influenza a virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JSD OCA].
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==Reference==
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<ref group="xtra">PMID:11867515</ref><references group="xtra"/>
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[[Category: Influenza a virus]]
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[[Category: Ha, Y.]]
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[[Category: Skehel, J J.]]
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[[Category: Steven, D J.]]
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[[Category: Wiley, D C.]]
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[[Category: Influenza]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 09:28:31 2009''
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Current revision

CRYSTAL STRUCTURE OF SWINE H9 HAEMAGGLUTININ

PDB ID 1jsd

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