2ze7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:57, 13 March 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2ze7.png|left|200px]]
 
-
<!--
+
==Crystal Structure of adenosine phosphate-isopentenyltransferase complexed with zinc ion and substrate analog, DMASPP==
-
The line below this paragraph, containing "STRUCTURE_2ze7", creates the "Structure Box" on the page.
+
<StructureSection load='2ze7' size='340' side='right'caption='[[2ze7]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2ze7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZE7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZE7 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=DST:DIMETHYLALLYL+S-THIOLODIPHOSPHATE'>DST</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_2ze7| PDB=2ze7 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ze7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ze7 OCA], [https://pdbe.org/2ze7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ze7 RCSB], [https://www.ebi.ac.uk/pdbsum/2ze7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ze7 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of adenosine phosphate-isopentenyltransferase complexed with zinc ion and substrate analog, DMASPP===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/IPTZ_AGRFC IPTZ_AGRFC] Transfers dimethylallyl groups to AMP as part of the biosynthesis of cytokinin phytohormones.[REFERENCE:5]
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_18258747}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 18258747 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ze/2ze7_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_18258747}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
2ZE7 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZE7 OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ze7 ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:18258747</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Adenylate dimethylallyltransferase]]
+
[[Category: Agrobacterium tumefaciens]]
[[Category: Agrobacterium tumefaciens]]
-
[[Category: Sakakibara, H.]]
+
[[Category: Large Structures]]
-
[[Category: Crown gall tumor]]
+
[[Category: Sakakibara H]]
-
[[Category: Cytokinin biosynthesis]]
+
-
[[Category: Plasmid]]
+
-
[[Category: Transferase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 09:43:10 2009''
+

Current revision

Crystal Structure of adenosine phosphate-isopentenyltransferase complexed with zinc ion and substrate analog, DMASPP

PDB ID 2ze7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2ze7"
Personal tools