Template:STRUCTURE 1g28

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Current revision (15:43, 21 November 2012) (edit) (undo)
 
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{{Structure
{{Structure
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|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1g28]], resolution 2.73&Aring; (<scene name='initialview01'>default scene</scene>)}}}
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|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1g28]], [[Resolution|resolution]] 2.73&Aring; (<scene name='initialview01'>default scene</scene>)}}}
|LIGAND= <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>
|LIGAND= <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>
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|GENE= PHY3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2759 Eukaryota])
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|GENE= PHY3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=13818 Adiantum capillus-veneris])
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00130 PAS], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00086 PAC]</span>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1g28 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g28 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1g28 RCSB], [http://www.ebi.ac.uk/pdbsum/1g28 PDBsum]</span>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1g28 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g28 OCA], [http://www.ebi.ac.uk/pdbsum/1g28 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1g28 RCSB]</span>
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|FUNCTION={{GO|id=GO:0000166 | text = nucleotide binding}}{{GO|id=GO:0004872 | text = receptor activity}}{{GO|id=GO:0004871 | text = signal transducer activity}}{{GO|id=GO:0008020 | text = G-protein coupled photoreceptor activity}}{{GO|id=GO:0005524 | text = ATP binding}}{{GO|id=GO:0004674 | text = protein serine/threonine kinase activity}}{{GO|id=GO:0000155 | text = two-component sensor activity}}{{GO|id=GO:0016740 | text = transferase activity}}{{GO|id=GO:0004672 | text = protein kinase activity}}{{GO|id=GO:0009881 | text = photoreceptor activity}}{{GO|id=GO:0016301 | text = kinase activity}}
|FUNCTION={{GO|id=GO:0000166 | text = nucleotide binding}}{{GO|id=GO:0004872 | text = receptor activity}}{{GO|id=GO:0004871 | text = signal transducer activity}}{{GO|id=GO:0008020 | text = G-protein coupled photoreceptor activity}}{{GO|id=GO:0005524 | text = ATP binding}}{{GO|id=GO:0004674 | text = protein serine/threonine kinase activity}}{{GO|id=GO:0000155 | text = two-component sensor activity}}{{GO|id=GO:0016740 | text = transferase activity}}{{GO|id=GO:0004672 | text = protein kinase activity}}{{GO|id=GO:0009881 | text = photoreceptor activity}}{{GO|id=GO:0016301 | text = kinase activity}}
|PROCESS={{GO|id=GO:0007600 | text = sensory perception}}{{GO|id=GO:0045449 | text = regulation of transcription}}{{GO|id=GO:0018298 | text = protein-chromophore linkage}}{{GO|id=GO:0006468 | text = protein amino acid phosphorylation}}{{GO|id=GO:0000160 | text = two-component signal transduction system (phosphorelay)}}{{GO|id=GO:0007165 | text = signal transduction}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}
|PROCESS={{GO|id=GO:0007600 | text = sensory perception}}{{GO|id=GO:0045449 | text = regulation of transcription}}{{GO|id=GO:0018298 | text = protein-chromophore linkage}}{{GO|id=GO:0006468 | text = protein amino acid phosphorylation}}{{GO|id=GO:0000160 | text = two-component signal transduction system (phosphorelay)}}{{GO|id=GO:0007165 | text = signal transduction}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g28A00 1G28A00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g28B00 1G28B00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g28C00 1G28C00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g28D00 1G28D00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003018 Ipr003018], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001294 Ipr001294], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002290 Ipr002290], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000719 Ipr000719], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013515 Ipr013515], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013654 Ipr013654], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013516 Ipr013516], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000700 Ipr000700], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013655 Ipr013655], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011009 Ipr011009], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001610 Ipr001610], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008271 Ipr008271], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000014 Ipr000014]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF08447 PF08447]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60216 d1g28a_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60217 d1g28b_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60218 d1g28c_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60219 d1g28d_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q9ZWQ6 Q9ZWQ6]</span>
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g28A00 1G28A00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g28B00 1G28B00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g28C00 1G28C00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g28D00 1G28D00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003018 Ipr003018], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001294 Ipr001294], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002290 Ipr002290], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000719 Ipr000719], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013515 Ipr013515], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013654 Ipr013654], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013516 Ipr013516], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000700 Ipr000700], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013655 Ipr013655], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011009 Ipr011009], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001610 Ipr001610], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008271 Ipr008271], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000014 Ipr000014]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF08447 PF08447]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60216 d1g28a_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60217 d1g28b_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60218 d1g28c_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60219 d1g28d_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q9ZWQ6 Q9ZWQ6]</span>
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|CONSURF={{!}}-
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|uPDB=1G28|CONSURF={{!}}-
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
{{!}} '''Toggle Conservation Colors:'''
{{!}} '''Toggle Conservation Colors:'''
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
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Rows = identical sequences:
 
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<jmol>
 
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<jmolButton>
 
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<script></script>
 
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<text>A [x]</text>
 
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<name>jmb_1g28_A</name>
 
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<title>toggle chain A</title>
 
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 
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</jmolButton>
 
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</jmol>
 
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<jmol>
 
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<jmolButton>
 
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<script></script>
 
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<text>B [x]</text>
 
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<name>jmb_1g28_B</name>
 
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<title>toggle chain B</title>
 
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 
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</jmolButton>
 
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</jmol>
 
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<jmol>
 
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<jmolButton>
 
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<script></script>
 
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<text>C [x]</text>
 
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<name>jmb_1g28_C</name>
 
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<title>toggle chain C</title>
 
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 
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</jmolButton>
 
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</jmol>
 
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<jmol>
 
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<jmolButton>
 
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<script></script>
 
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<text>D [x]</text>
 
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<name>jmb_1g28_D</name>
 
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<title>toggle chain D</title>
 
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 
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</jmolButton>
 
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</jmol>
 
}}
}}

Current revision

Drag the structure with the mouse to rotate
1g28, resolution 2.73Å ()
Ligands:
Gene: PHY3 (Adiantum capillus-veneris)
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


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