2icu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2icu" size="450" color="white" frame="true" align="right" spinBox="true" caption="2icu, resolution 1.60&Aring;" /> '''Crystal Structure of...)
Current revision (08:12, 30 October 2024) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2icu.gif|left|200px]]<br /><applet load="2icu" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2icu, resolution 1.60&Aring;" />
 
-
'''Crystal Structure of Hypothetical Protein YedK From Escherichia coli'''<br />
 
-
==About this Structure==
+
==Crystal Structure of Hypothetical Protein YedK From Escherichia coli==
-
2ICU is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2ICU OCA].
+
<StructureSection load='2icu' size='340' side='right'caption='[[2icu]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
[[Category: Escherichia coli]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2icu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ICU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ICU FirstGlance]. <br>
-
[[Category: Chen, L.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
[[Category: Ebihara, A.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Initiative, Riken.Structural.Genomics.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2icu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2icu OCA], [https://pdbe.org/2icu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2icu RCSB], [https://www.ebi.ac.uk/pdbsum/2icu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2icu ProSAT], [https://www.topsan.org/Proteins/SECSG/2icu TOPSAN]</span></td></tr>
-
[[Category: Li, Y.]]
+
</table>
-
[[Category: Liu, Z.J.]]
+
== Function ==
-
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
+
[https://www.uniprot.org/uniprot/YEDK_ECOLI YEDK_ECOLI]
-
[[Category: Rose, J.]]
+
== Evolutionary Conservation ==
-
[[Category: SECSG, Southeast.Collaboratory.for.Structural.Genomics.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Wang, B.C.]]
+
Check<jmol>
-
[[Category: Yokoyama, S.]]
+
<jmolCheckbox>
-
[[Category: Zhao, M.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ic/2icu_consurf.spt"</scriptWhenChecked>
-
[[Category: hypothetical protein yedk]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: protein structure initiative]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: psi]]
+
</jmolCheckbox>
-
[[Category: riken]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2icu ConSurf].
-
[[Category: riken structural genomics/proteomics initiative]]
+
<div style="clear:both"></div>
-
[[Category: rsgi]]
+
__TOC__
-
[[Category: secsg]]
+
</StructureSection>
-
[[Category: southeast collaboratory for structural genomics]]
+
[[Category: Escherichia coli K-12]]
-
[[Category: structural genomics]]
+
[[Category: Large Structures]]
-
 
+
[[Category: Chen L]]
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 12:15:00 2007''
+
[[Category: Ebihara A]]
 +
[[Category: Li Y]]
 +
[[Category: Liu ZJ]]
 +
[[Category: Structural genomic]]
 +
[[Category: Rose J]]
 +
[[Category: Wang BC]]
 +
[[Category: Yokoyama S]]
 +
[[Category: Zhao M]]

Current revision

Crystal Structure of Hypothetical Protein YedK From Escherichia coli

PDB ID 2icu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2icu"
Personal tools