1e3j

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{{Seed}}
 
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[[Image:1e3j.png|left|200px]]
 
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==Ketose reductase (sorbitol dehydrogenase) from silverleaf whitefly==
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The line below this paragraph, containing "STRUCTURE_1e3j", creates the "Structure Box" on the page.
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<StructureSection load='1e3j' size='340' side='right'caption='[[1e3j]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1e3j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bemisia_argentifolii Bemisia argentifolii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E3J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E3J FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BO3:BORIC+ACID'>BO3</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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{{STRUCTURE_1e3j| PDB=1e3j | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e3j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e3j OCA], [https://pdbe.org/1e3j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e3j RCSB], [https://www.ebi.ac.uk/pdbsum/1e3j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e3j ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/O96496_BEMAR O96496_BEMAR]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e3/1e3j_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e3j ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Polyhydric alcohols are widely found in nature and can be accumulated to high concentrations as a protection against a variety of environmental stresses. It is only recently, however, that these molecules have been shown to be active in protection against heat stress, specifically in the use of sorbitol by the silverleaf whitefly, Bemisia argentifolii. We have determined the structure of the enzyme responsible for production of sorbitol in Bemisia argentifolii, NADP(H)-dependent ketose reductase (BaKR), to 2.3 A resolution. The structure was solved by multiwavelength anomalous diffraction (MAD) using the anomalous scattering from two zinc atoms bound in the structure, and was refined to an R factor of 21.9 % (R(free)=25.1 %). BaKR belongs to the medium-chain dehydrogenase family and its structure is the first for the sorbitol dehydrogenase branch of this family. The enzyme is tetrameric, with the monomer having a very similar fold to the alcohol dehydrogenases (ADHs). Although the structure determined is for the apo form, a phosphate ion in the active site marks the likely position for the adenyl phosphate of NADP(H). The catalytic zinc ion is tetrahedrally coordinated to Cys41, His66, Glu67 and a water molecule, in a modification of the zinc site usually found in ADHs. This modified zinc site seems likely to be a conserved feature of the sorbitol dehydrogenase sub-family. Comparisons with other members of the ADH family have also enabled us to model a ternary complex of the enzyme, and suggest how structural differences may influence coenzyme binding and substrate specificity in the reduction of fructose to sorbitol.
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===KETOSE REDUCTASE (SORBITOL DEHYDROGENASE) FROM SILVERLEAF WHITEFLY===
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Crystal structure of the NADP(H)-dependent ketose reductase from Bemisia argentifolii at 2.3 A resolution.,Banfield MJ, Salvucci ME, Baker EN, Smith CA J Mol Biol. 2001 Feb 16;306(2):239-50. PMID:11237597<ref>PMID:11237597</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_11237597}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 1e3j" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 11237597 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_11237597}}
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__TOC__
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</StructureSection>
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==About this Structure==
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1E3J is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bemisia_argentifolii Bemisia argentifolii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E3J OCA].
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==Reference==
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<ref group="xtra">PMID:11237597</ref><references group="xtra"/>
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[[Category: Bemisia argentifolii]]
[[Category: Bemisia argentifolii]]
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[[Category: Baker, E N.]]
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[[Category: Large Structures]]
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[[Category: Banfield, M J.]]
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[[Category: Baker EN]]
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[[Category: Salvucci, M E.]]
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[[Category: Banfield MJ]]
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[[Category: Smith, C A.]]
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[[Category: Salvucci ME]]
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[[Category: Fructose reduction]]
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[[Category: Smith CA]]
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[[Category: Oxidoreductase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 10:09:43 2009''
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Current revision

Ketose reductase (sorbitol dehydrogenase) from silverleaf whitefly

PDB ID 1e3j

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