1y2i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:01, 17 October 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1y2i.png|left|200px]]
 
-
<!--
+
==Crystal Structure of MCSG Target APC27401 from Shigella flexneri==
-
The line below this paragraph, containing "STRUCTURE_1y2i", creates the "Structure Box" on the page.
+
<StructureSection load='1y2i' size='340' side='right'caption='[[1y2i]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1y2i]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri_2a_str._2457T Shigella flexneri 2a str. 2457T]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y2I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y2I FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_1y2i| PDB=1y2i | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y2i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y2i OCA], [https://pdbe.org/1y2i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y2i RCSB], [https://www.ebi.ac.uk/pdbsum/1y2i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y2i ProSAT], [https://www.topsan.org/Proteins/MCSG/1y2i TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of MCSG Target APC27401 from Shigella flexneri===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/YBJQ_SHIFL YBJQ_SHIFL]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1Y2I is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y2I OCA].
+
Check<jmol>
-
[[Category: Shigella flexneri]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y2/1y2i_consurf.spt"</scriptWhenChecked>
-
[[Category: Anderson, W F.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Brunzelle, J S.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Collart, F R.]]
+
</jmolCheckbox>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y2i ConSurf].
-
[[Category: Minasov, G.]]
+
<div style="clear:both"></div>
-
[[Category: Shuvalova, L.]]
+
__TOC__
-
[[Category: Yang, X.]]
+
</StructureSection>
-
[[Category: Hypothetical protein]]
+
[[Category: Large Structures]]
-
[[Category: Mcsg]]
+
[[Category: Shigella flexneri 2a str. 2457T]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Anderson WF]]
-
[[Category: Pentamer]]
+
[[Category: Brunzelle JS]]
-
[[Category: Protein structure initiative]]
+
[[Category: Collart FR]]
-
[[Category: Psi]]
+
[[Category: Minasov G]]
-
[[Category: Structural genomic]]
+
[[Category: Shuvalova L]]
-
 
+
[[Category: Yang X]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 20:08:06 2009''
+

Current revision

Crystal Structure of MCSG Target APC27401 from Shigella flexneri

PDB ID 1y2i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools