2iol

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(New page: 200px<br /><applet load="2iol" size="450" color="white" frame="true" align="right" spinBox="true" caption="2iol, resolution 2.00&Aring;" /> '''Crystal structure of...)
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[[Image:2iol.gif|left|200px]]<br /><applet load="2iol" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="2iol, resolution 2.00&Aring;" />
 
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'''Crystal structure of the C-terminal MA3 domain of Pdcd4 (mouse); form 1'''<br />
 
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==Overview==
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==Crystal structure of the C-terminal MA3 domain of Pdcd4 (mouse); form 1==
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The tumor suppressor function of Programmed Cell Death 4 (Pdcd4) is, achieved through interactions between Pdcd4 and components of the, translation initiation complex, namely, the RNA helicase eIF4A and the, scaffolding protein eIF4G. These interactions are mediated through two MA3, domains on the Pdcd4 molecule and result in inhibition of protein, synthesis. We have solved the high-resolution crystal structure of the, C-terminal MA3 (cMA3) domain of Pdcd4 in several crystal forms and, demonstrated its similarity to the MA3 domain of eIF4G. As predicted by, the structure, the cMA3 domain competes with eIF4Gc for binding to eIF4A, and surprisingly is sufficient to inhibit translation initiation., Mutations that abolish eIF4A binding negate both functions of the cMA3., Interestingly mutations in the Akt phosphorylation site influenced neither, cMA3 binding to eIF4A nor its ability to inhibit translation initiation., Finally, our structural analysis reveals MA3 domains to be a novel, subfamily of VHS domains.
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<StructureSection load='2iol' size='340' side='right'caption='[[2iol]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2iol]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IOL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IOL FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iol FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iol OCA], [https://pdbe.org/2iol PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iol RCSB], [https://www.ebi.ac.uk/pdbsum/2iol PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iol ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/io/2iol_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2iol ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The tumor suppressor function of Programmed Cell Death 4 (Pdcd4) is achieved through interactions between Pdcd4 and components of the translation initiation complex, namely, the RNA helicase eIF4A and the scaffolding protein eIF4G. These interactions are mediated through two MA3 domains on the Pdcd4 molecule and result in inhibition of protein synthesis. We have solved the high-resolution crystal structure of the C-terminal MA3 (cMA3) domain of Pdcd4 in several crystal forms and demonstrated its similarity to the MA3 domain of eIF4G. As predicted by the structure, the cMA3 domain competes with eIF4Gc for binding to eIF4A and surprisingly is sufficient to inhibit translation initiation. Mutations that abolish eIF4A binding negate both functions of the cMA3. Interestingly mutations in the Akt phosphorylation site influenced neither cMA3 binding to eIF4A nor its ability to inhibit translation initiation. Finally, our structural analysis reveals MA3 domains to be a novel subfamily of VHS domains.
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==About this Structure==
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Structural basis for inhibition of translation by the tumor suppressor Pdcd4.,LaRonde-LeBlanc N, Santhanam AN, Baker AR, Wlodawer A, Colburn NH Mol Cell Biol. 2007 Jan;27(1):147-56. Epub 2006 Oct 23. PMID:17060447<ref>PMID:17060447</ref>
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2IOL is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2IOL OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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Structural basis for inhibition of translation by the tumor suppressor Pdcd4., LaRonde-LeBlanc N, Santhanam AN, Baker AR, Wlodawer A, Colburn NH, Mol Cell Biol. 2007 Jan;27(1):147-56. Epub 2006 Oct 23. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17060447 17060447]
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</div>
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[[Category: Mus musculus]]
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<div class="pdbe-citations 2iol" style="background-color:#fffaf0;"></div>
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[[Category: Single protein]]
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[[Category: LaRonde-LeBlanc, N.A.]]
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[[Category: Wlodawer, A.]]
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[[Category: alpha-helical]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 12:24:17 2007''
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==See Also==
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*[[Cell death protein 3D structures|Cell death protein 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Mus musculus]]
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[[Category: LaRonde-LeBlanc NA]]
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[[Category: Wlodawer A]]

Current revision

Crystal structure of the C-terminal MA3 domain of Pdcd4 (mouse); form 1

PDB ID 2iol

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