This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2w8f
From Proteopedia
(Difference between revisions)
| (13 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Aplysia californica AChBP bound to in silico compound 31== | |
| + | <StructureSection load='2w8f' size='340' side='right'caption='[[2w8f]], [[Resolution|resolution]] 2.70Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2w8f]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Aplysia_californica Aplysia californica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W8F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W8F FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BS1:(3-EXO)-3-(10,11-DIHYDRO-5H-DIBENZO[A,D][7]ANNULEN-5-YLOXY)-8,8-DIMETHYL-8-AZONIABICYCLO[3.2.1]OCTANE'>BS1</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w8f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w8f OCA], [https://pdbe.org/2w8f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w8f RCSB], [https://www.ebi.ac.uk/pdbsum/2w8f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w8f ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q8WSF8_APLCA Q8WSF8_APLCA] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w8/2w8f_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2w8f ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| - | + | *[[Acetylcholine binding protein 3D structures|Acetylcholine binding protein 3D structures]] | |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Aplysia californica]] | |
| + | [[Category: Large Structures]] | ||
| + | [[Category: Akdemir A]] | ||
| + | [[Category: Bertrand D]] | ||
| + | [[Category: Bertrand S]] | ||
| + | [[Category: Edink E]] | ||
| + | [[Category: Jongejan A]] | ||
| + | [[Category: Leurs R]] | ||
| + | [[Category: Perrakis A]] | ||
| + | [[Category: Sixma TK]] | ||
| + | [[Category: Smit AB]] | ||
| + | [[Category: Ulens C]] | ||
| + | [[Category: De Esch IJ]] | ||
| + | [[Category: Van Elk R]] | ||
Current revision
Aplysia californica AChBP bound to in silico compound 31
| |||||||||||
Categories: Aplysia californica | Large Structures | Akdemir A | Bertrand D | Bertrand S | Edink E | Jongejan A | Leurs R | Perrakis A | Sixma TK | Smit AB | Ulens C | De Esch IJ | Van Elk R
