< User:Jaime Prilusky(Difference between revisions)
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| | + | <applet load='1stp' size='300' frame='true' align='right' caption='Insert caption here' /> |
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| | + | Sample of tags in bulleted list |
| | + | * first a <scene name='User:Jaime_Prilusky/Sandbox/Test1/1'>small</scene> one |
| | + | * now a plain <scene name='User:Jaime_Prilusky/Sandbox/Simple1stp/1'>1stp</scene> |
| | + | * <scene name='User:Jaime_Prilusky/Sandbox/Simple1stp/2'>and a simple 1stp</scene> |
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| - | | + | <ref name='this is a test of a comment inside a reference'>PMID 19954984</ref> |
| - | {{Structure
| + | <references/> |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2ace]], resolution 2.50Å (<scene name='initialview01'>default scene</scene>)}}}
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| - | |SITE= <scene name='pdbsite=CAT:Catalytic+Triad'>CAT</scene>
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| - | |LIGAND= <scene name='pdbligand=ACH:ACETYLCHOLINE'>ACH</scene>
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| - | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Acetylcholinesterase Acetylcholinesterase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.7 3.1.1.7] </span>
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| - | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00312 Esterase_lipase], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00135 COesterase]</span>
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| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ace FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ace OCA], [http://www.ebi.ac.uk/pdbsum/2ace PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ace RCSB]</span>
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| - | |FUNCTION={{GO|id=GO:0016787 | text = hydrolase activity}}{{GO|id=GO:0003990 | text = acetylcholinesterase activity}}{{GO|id=GO:0004104 | text = cholinesterase activity}}{{GO|id=GO:0048503 | text = GPI anchor binding}}
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| - | |PROCESS={{GO|id=GO:0042135 | text = neurotransmitter catabolic process}}{{GO|id=GO:0001507 | text = acetylcholine catabolic process in synaptic cleft}}
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| - | |COMPONENT={{GO|id=GO:0045202 | text = synapse}}{{GO|id=GO:0030054 | text = cell junction}}{{GO|id=GO:0016020 | text = membrane}}
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| - | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2ace000 2Ace000]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000908 Ipr000908], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002018 Ipr002018], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000997 Ipr000997]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00135 PF00135]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=34582 d2ace__]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P04058 P04058]</span>
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| - | |CONSURF={{!}}-
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| - | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
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| - | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
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| - | {{!}} '''Toggle Conservation Colors:'''
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| - | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
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| - | Rows = identical sequences:
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| - | <jmol>
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| - | <jmolButton>
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| - | <script></script>
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| - | <text>A [x]</text>
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| - | <name>jmb_2ace_A</name>
| + | |
| - | <title>toggle chain A</title>
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| - | <jsscript>ConsurfChainButton(elementClicked)</jsscript>
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| - | <appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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| - | </jmolButton>
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| - | </jmol>
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| - | | + | |
| - | }}
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| | <!-- | | <!-- |
| - | This is a sample <ref>Richardson DC, Richardson JS. The kinemage: a tool for scientific communication.
| + | MageJava <kinemage align="right" width="420" height="300" file="PFK1.kin"/> |
| - | Protein Sci. 1992 1:3-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/1304880 1304880]</ref> of the
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| - | standard references and one <ref>PMID:18673581</ref> with the PubmedID only new option.
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| - | | + | |
| - | == References == | + | |
| - | <references/>
| + | |
| | | | |
| - | == Additional Literature and Resources ==
| + | {{Clear}} |
| - | <ref group="xtra">PMID:15068885</ref><ref group="xtra">PMID:14749769</ref><ref group="xtra">PMID:18673581</ref><ref group="xtra">PMID:1304880</ref><ref group="xtra">PMID:16270100</ref><ref group="xtra">PMID:14661029</ref>
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| - | <references group="xtra"/>
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| - | <applet load='1org' size='300' frame='true' align='right' caption='Insert caption here' />
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| - | <scene name='User:Jaime_Prilusky/Sandbox/Xtest1/1'>TextToBeDisplayed</scene> | + | KiNG <kinemage align="right" width="420" height="300" file="Lee.kin" code="king" /> |
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| | + | <kinemage align="right" width="420" height="300" file="Coiled_coil2.kin" code="king" /> |
| | --> | | --> |
