This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2fna

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:44, 25 January 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2fna.png|left|200px]]
 
-
<!--
+
==Crystal structure of an archaeal aaa+ atpase (sso1545) from sulfolobus solfataricus p2 at 2.00 A resolution==
-
The line below this paragraph, containing "STRUCTURE_2fna", creates the "Structure Box" on the page.
+
<StructureSection load='2fna' size='340' side='right'caption='[[2fna]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2fna]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus_P2 Saccharolobus solfataricus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FNA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FNA FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fna FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fna OCA], [https://pdbe.org/2fna PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fna RCSB], [https://www.ebi.ac.uk/pdbsum/2fna PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fna ProSAT], [https://www.topsan.org/Proteins/JCSG/2fna TOPSAN]</span></td></tr>
-
{{STRUCTURE_2fna| PDB=2fna | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of (13814777) from SULFOLOBUS SOLFATARICUS at 2.00 A resolution===
+
[https://www.uniprot.org/uniprot/Q97Y08_SACS2 Q97Y08_SACS2]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2FNA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus_p2 Sulfolobus solfataricus p2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FNA OCA].
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fn/2fna_consurf.spt"</scriptWhenChecked>
-
==Reference==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
Crystal structure of a novel archaeal AAA+ ATPase SSO1545 from Sulfolobus solfataricus., Xu Q, Rife CL, Carlton D, Miller MD, Krishna SS, Elsliger MA, Abdubek P, Astakhova T, Chiu HJ, Clayton T, Duan L, Feuerhelm J, Grzechnik SK, Hale J, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kumar A, McMullan D, Morse AT, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Reyes R, van den Bedem H, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA, Proteins. 2009 Mar;74(4):1041-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/19089981 19089981]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Sulfolobus solfataricus p2]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fna ConSurf].
-
[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
+
<div style="clear:both"></div>
-
[[Category: 13814777]]
+
__TOC__
-
[[Category: Jcsg]]
+
</StructureSection>
-
[[Category: Joint center for structural genomic]]
+
[[Category: Large Structures]]
-
[[Category: Protein structure initiative]]
+
[[Category: Saccharolobus solfataricus P2]]
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 11 20:20:57 2009''
+

Current revision

Crystal structure of an archaeal aaa+ atpase (sso1545) from sulfolobus solfataricus p2 at 2.00 A resolution

PDB ID 2fna

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2fna"
Personal tools