2pl8

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{{Seed}}
 
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[[Image:2pl8.png|left|200px]]
 
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==D(GTATACC) under hydrostatic pressure of 1.04 GPa==
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The line below this paragraph, containing "STRUCTURE_2pl8", creates the "Structure Box" on the page.
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<StructureSection load='2pl8' size='340' side='right'caption='[[2pl8]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2pl8]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PL8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PL8 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SPM:SPERMINE'>SPM</scene></td></tr>
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{{STRUCTURE_2pl8| PDB=2pl8 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pl8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pl8 OCA], [https://pdbe.org/2pl8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pl8 RCSB], [https://www.ebi.ac.uk/pdbsum/2pl8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pl8 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The behaviour of the d(GGTATACC) oligonucleotide has been investigated by X-ray crystallography at 295 K in the range from ambient pressure to 2 GPa (approximately 20,000 atm). Four 3D-structures of the A-DNA form (at ambient pressure, 0.55, 1.09 and 1.39 GPa) were refined at 1.60 or 1.65 A resolution. In addition to the diffraction pattern of the A-form, the broad meridional streaks previously explained by occluded B-DNA octamers within the channels of the crystalline A-form matrix were observed up to at least 2 GPa. This work highlights an important property of nucleic acids, their capability to withstand very high pressures, while keeping in such conditions a nearly invariant geometry of base pairs that store and carry genetic information. The double-helix base-paired architecture behaves as a molecular spring, which makes it especially adapted to very harsh conditions. These features may have contributed to the emergence of a RNA World at prebiotic stage.
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===D(GTATACC) under hydrostatic pressure of 1.04 GPa===
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Adaptation of the base-paired double-helix molecular architecture to extreme pressure.,Girard E, Prange T, Dhaussy AC, Migianu-Griffoni E, Lecouvey M, Chervin JC, Mezouar M, Kahn R, Fourme R Nucleic Acids Res. 2007;35(14):4800-8. Epub 2007 Jul 7. PMID:17617642<ref>PMID:17617642</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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The line below this paragraph, {{ABSTRACT_PUBMED_17617642}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2pl8" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 17617642 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_17617642}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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2PL8 is a [[Single protein]] structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PL8 OCA].
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[[Category: Fourme R]]
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[[Category: Girard E]]
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==Reference==
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[[Category: Kahn R]]
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Adaptation of the base-paired double-helix molecular architecture to extreme pressure., Girard E, Prange T, Dhaussy AC, Migianu-Griffoni E, Lecouvey M, Chervin JC, Mezouar M, Kahn R, Fourme R, Nucleic Acids Res. 2007;35(14):4800-8. Epub 2007 Jul 7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17617642 17617642]
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[[Category: Prange T]]
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Coexistence of A- and B-form DNA in a single crystal lattice., Doucet J, Benoit JP, Cruse WB, Prange T, Kennard O, Nature. 1989 Jan 12;337(6203):190-2. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/2911354 2911354]
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High-pressure protein crystallography (HPPX): instrumentation, methodology and results on lysozyme crystals., Fourme R, Kahn R, Mezouar M, Girard E, Hoerentrup C, Prange T, Ascone I, J Synchrotron Radiat. 2001 Sep 1;8(Pt 5):1149-56. Epub 2001 Aug 28. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11524565 11524565]
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High pressure macromolecular crystallography: the 140-MPa crystal structure at 2.3 A resolution of urate oxidase, a 135-kDa tetrameric assembly., Colloc'h N, Girard E, Dhaussy AC, Kahn R, Ascone I, Mezouar M, Fourme R, Biochim Biophys Acta. 2006 Mar;1764(3):391-7. Epub 2006 Jan 26. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16478683 16478683]
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Crystal structure of hen egg-white lysozyme at a hydrostatic pressure of 1000 atmospheres., Kundrot CE, Richards FM, J Mol Biol. 1987 Jan 5;193(1):157-70. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/3586017 3586017]
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[[Category: Single protein]]
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[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
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[[Category: Crystal structure]]
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[[Category: Dna]]
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[[Category: High-pressure]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 18 20:31:44 2009''
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Current revision

D(GTATACC) under hydrostatic pressure of 1.04 GPa

PDB ID 2pl8

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