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2kfp

From Proteopedia

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(New page: '''Unreleased structure''' The entry 2kfp is ON HOLD Authors: Feldmann, E.A., Ramelot, T.A., Zhao, L., Hamilton, K., Ciccosanti, C., Xiao, R., Nair, R., Everett, J.K., Swapna, G., Acton...)
Current revision (09:47, 9 May 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 2kfp is ON HOLD
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==Solution NMR structure of PSPTO_3016 from Pseudomonas syringae. Northeast Structural Genomics Consortium target PsR293.==
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<StructureSection load='2kfp' size='340' side='right'caption='[[2kfp]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2kfp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._tomato Pseudomonas syringae pv. tomato]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KFP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KFP FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kfp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kfp OCA], [https://pdbe.org/2kfp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kfp RCSB], [https://www.ebi.ac.uk/pdbsum/2kfp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kfp ProSAT], [https://www.topsan.org/Proteins/NESGC/2kfp TOPSAN]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q880Y4_PSESM Q880Y4_PSESM]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kf/2kfp_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kfp ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The protein Pspto_3016 is a 117-residue member of the protein domain family PF04237 (DUF419), which is to date a functionally uncharacterized family of proteins. In this report, we describe the structure of Pspto_3016 from Pseudomonas syringae solved by both solution NMR and X-ray crystallography at 2.5 A resolution. In both cases, the structure of Pspto_3016 adopts a "double wing" alpha/beta sandwich fold similar to that of protein YjbR from Escherichia coli and to the C-terminal DNA binding domain of the MotA transcription factor (MotCF) from T4 bacteriophage, along with other uncharacterized proteins. Pspto_3016 was selected by the Protein Structure Initiative of the National Institutes of Health and the Northeast Structural Genomics Consortium (NESG ID PsR293).
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Authors: Feldmann, E.A., Ramelot, T.A., Zhao, L., Hamilton, K., Ciccosanti, C., Xiao, R., Nair, R., Everett, J.K., Swapna, G., Acton, T.B., Rost, B., Montelione, G.T., Kennedy, M.A., Northeast Structural Genomics Consortium (NESG)
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Solution NMR and X-ray crystal structures of Pseudomonas syringae Pspto_3016 from protein domain family PF04237 (DUF419) adopt a "double wing" DNA binding motif.,Feldmann EA, Seetharaman J, Ramelot TA, Lew S, Zhao L, Hamilton K, Ciccosanti C, Xiao R, Acton TB, Everett JK, Tong L, Montelione GT, Kennedy MA J Struct Funct Genomics. 2012 Sep;13(3):155-62. Epub 2012 Aug 3. PMID:22865330<ref>PMID:22865330</ref>
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Description: Solution NMR structure of PSPTO_3016 from Pseudomonas syringae. Northeast Structural Genomics Consortium target PsR293.
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 22 10:21:55 2009''
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<div class="pdbe-citations 2kfp" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Pseudomonas syringae pv. tomato]]
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[[Category: Acton TB]]
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[[Category: Ciccosanti C]]
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[[Category: Everett JK]]
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[[Category: Feldmann EA]]
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[[Category: Hamilton K]]
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[[Category: Kennedy MA]]
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[[Category: Montelione GT]]
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[[Category: Nair R]]
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[[Category: Ramelot TA]]
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[[Category: Rost B]]
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[[Category: Swapna G]]
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[[Category: Xiao R]]
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[[Category: Zhao L]]

Current revision

Solution NMR structure of PSPTO_3016 from Pseudomonas syringae. Northeast Structural Genomics Consortium target PsR293.

PDB ID 2kfp

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