2ra5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:29, 17 October 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2ra5.png|left|200px]]
 
-
<!--
+
==Crystal structure of the putative transcriptional regulator from Streptomyces coelicolor==
-
The line below this paragraph, containing "STRUCTURE_2ra5", creates the "Structure Box" on the page.
+
<StructureSection load='2ra5' size='340' side='right'caption='[[2ra5]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2ra5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_coelicolor_A3(2) Streptomyces coelicolor A3(2)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RA5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RA5 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SRT:S,R+MESO-TARTARIC+ACID'>SRT</scene></td></tr>
-
{{STRUCTURE_2ra5| PDB=2ra5 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ra5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ra5 OCA], [https://pdbe.org/2ra5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ra5 RCSB], [https://www.ebi.ac.uk/pdbsum/2ra5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ra5 ProSAT], [https://www.topsan.org/Proteins/MCSG/2ra5 TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of the putative transcriptional regulator from Streptomyces coelicolor===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q9RKT6_STRCO Q9RKT6_STRCO]
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_17982461}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 17982461 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ra/2ra5_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_17982461}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
2RA5 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RA5 OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ra5 ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:17982461</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Bacteria]]
+
[[Category: Large Structures]]
-
[[Category: Edwards, A M.]]
+
[[Category: Edwards AM]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Joachimiak A]]
-
[[Category: Kim, Y.]]
+
[[Category: Kim Y]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Savchenko A]]
-
[[Category: Savchenko, A.]]
+
[[Category: Xu X]]
-
[[Category: Xu, X.]]
+
[[Category: Zheng H]]
-
[[Category: Zheng, H.]]
+
-
[[Category: Beta structure]]
+
-
[[Category: Dna-binding]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Transcription]]
+
-
[[Category: Transcription regulation]]
+
-
[[Category: Utra domain]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 22 10:26:58 2009''
+

Current revision

Crystal structure of the putative transcriptional regulator from Streptomyces coelicolor

PDB ID 2ra5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools