This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2o2z
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2o2z" size="450" color="white" frame="true" align="right" spinBox="true" caption="2o2z, resolution 2.600Å" /> '''Crystal structure o...) |
|||
| (15 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2o2z.gif|left|200px]]<br /><applet load="2o2z" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2o2z, resolution 2.600Å" /> | ||
| - | '''Crystal structure of a protein of unknown function from UPF0052 family (NP_244435.1) from Bacillus halodurans at 2.60 A resolution'''<br /> | ||
| - | == | + | ==Crystal structure of a protein member of the upf0052 family (bh3568) from bacillus halodurans at 2.60 A resolution== |
| - | + | <StructureSection load='2o2z' size='340' side='right'caption='[[2o2z]], [[Resolution|resolution]] 2.60Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [[ | + | <table><tr><td colspan='2'>[[2o2z]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Alkalihalobacillus_halodurans Alkalihalobacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O2Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O2Z FirstGlance]. <br> |
| - | [ | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o2z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o2z OCA], [https://pdbe.org/2o2z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o2z RCSB], [https://www.ebi.ac.uk/pdbsum/2o2z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o2z ProSAT], [https://www.topsan.org/Proteins/JCSG/2o2z TOPSAN]</span></td></tr> |
| - | + | </table> | |
| - | + | == Function == | |
| - | [ | + | [https://www.uniprot.org/uniprot/GNGF_HALH5 GNGF_HALH5] Required for morphogenesis under gluconeogenic growth conditions.[HAMAP-Rule:MF_00973] |
| - | [ | + | == Evolutionary Conservation == |
| - | [[ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | + | Check<jmol> | |
| - | [ | + | <jmolCheckbox> |
| - | [[ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o2/2o2z_consurf.spt"</scriptWhenChecked> |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o2z ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Alkalihalobacillus halodurans]] | ||
| + | [[Category: Large Structures]] | ||
Current revision
Crystal structure of a protein member of the upf0052 family (bh3568) from bacillus halodurans at 2.60 A resolution
| |||||||||||
