This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2ocz
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2ocz" size="450" color="white" frame="true" align="right" spinBox="true" caption="2ocz, resolution 1.85Å" /> '''The Structure of a P...) |
|||
| (14 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2ocz.gif|left|200px]]<br /><applet load="2ocz" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2ocz, resolution 1.85Å" /> | ||
| - | '''The Structure of a Putative 3-Dehydroquinate Dehydratase from Streptococcus pyogenes.'''<br /> | ||
| - | == | + | ==The Structure of a Putative 3-Dehydroquinate Dehydratase from Streptococcus pyogenes.== |
| - | + | <StructureSection load='2ocz' size='340' side='right'caption='[[2ocz]], [[Resolution|resolution]] 1.85Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2ocz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_serotype_M1 Streptococcus pyogenes serotype M1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OCZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OCZ FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ocz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ocz OCA], [https://pdbe.org/2ocz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ocz RCSB], [https://www.ebi.ac.uk/pdbsum/2ocz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ocz ProSAT], [https://www.topsan.org/Proteins/MCSG/2ocz TOPSAN]</span></td></tr> |
| - | + | </table> | |
| - | [ | + | == Function == |
| - | [ | + | [https://www.uniprot.org/uniprot/AROD_STRP1 AROD_STRP1] |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | [ | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | [[ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oc/2ocz_consurf.spt"</scriptWhenChecked> |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | [ | + | </jmolCheckbox> |
| - | [[ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ocz ConSurf]. |
| - | [ | + | <div style="clear:both"></div> |
| - | + | ||
| - | + | ==See Also== | |
| + | *[[Dehydroquinase 3D structures|Dehydroquinase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Streptococcus pyogenes serotype M1]] | ||
| + | [[Category: Clancy S]] | ||
| + | [[Category: Cuff ME]] | ||
| + | [[Category: Duggan E]] | ||
| + | [[Category: Joachimiak A]] | ||
Current revision
The Structure of a Putative 3-Dehydroquinate Dehydratase from Streptococcus pyogenes.
| |||||||||||
