3drf

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{{Seed}}
 
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[[Image:3drf.jpg|left|200px]]
 
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==Lactococcal OppA complexed with an endogenous peptide in the closed conformation==
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The line below this paragraph, containing "STRUCTURE_3drf", creates the "Structure Box" on the page.
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<StructureSection load='3drf' size='340' side='right'caption='[[3drf]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3drf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_lactis_subsp._cremoris_MG1363 Lactococcus lactis subsp. cremoris MG1363]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DRF FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3drf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drf OCA], [https://pdbe.org/3drf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3drf RCSB], [https://www.ebi.ac.uk/pdbsum/3drf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3drf ProSAT]</span></td></tr>
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{{STRUCTURE_3drf| PDB=3drf | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A2RJ53_LACLM A2RJ53_LACLM]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/3drf_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3drf ConSurf].
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<div style="clear:both"></div>
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===Lactococcal OppA complexed with an endogenous peptide in the closed conformation===
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==See Also==
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*[[ABC transporter 3D structures|ABC transporter 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_19300437}}, adds the Publication Abstract to the page
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[[Category: Lactococcus lactis subsp. cremoris MG1363]]
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(as it appears on PubMed at http://www.pubmed.gov), where 19300437 is the PubMed ID number.
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[[Category: Large Structures]]
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[[Category: Berntsson RP-A]]
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{{ABSTRACT_PUBMED_19300437}}
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[[Category: Doeven MK]]
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[[Category: Duurkens RH]]
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==About this Structure==
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[[Category: Marrink S-J]]
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3DRF is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Lactococcus_lactis Lactococcus lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRF OCA].
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[[Category: Poolman B]]
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[[Category: Sengupta D]]
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==Reference==
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[[Category: Slotboom D-J]]
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<ref group="xtra">PMID:19300437</ref><references group="xtra"/>
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[[Category: Thunnissen A-M]]
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[[Category: Lactococcus lactis]]
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[[Category: Berntsson, R P.A.]]
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[[Category: Doeven, M K.]]
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[[Category: Duurkens, R H.]]
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[[Category: Marrink, S J.]]
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[[Category: Poolman, B.]]
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[[Category: Sengupta, D.]]
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[[Category: Slotboom, D J.]]
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[[Category: Thunnissen, A M.]]
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[[Category: Oligo-peptide binding]]
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[[Category: Peptide binding protein]]
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[[Category: Venus fly-trap]]
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[[Category: Voluminous binding cavity]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 2 15:29:53 2009''
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Current revision

Lactococcal OppA complexed with an endogenous peptide in the closed conformation

PDB ID 3drf

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OCA

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