3e2t

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{{Seed}}
 
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[[Image:3e2t_1.jpg|left|200px]]
 
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==The catalytic domain of chicken tryptophan hydroxylase 1 with bound tryptophan==
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The line below this paragraph, containing "STRUCTURE_3e2t", creates the "Structure Box" on the page.
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<StructureSection load='3e2t' size='340' side='right'caption='[[3e2t]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3e2t]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E2T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E2T FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRP:TRYPTOPHAN'>TRP</scene></td></tr>
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{{STRUCTURE_3e2t| PDB=3e2t | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e2t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e2t OCA], [https://pdbe.org/3e2t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e2t RCSB], [https://www.ebi.ac.uk/pdbsum/3e2t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e2t ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TPH1_CHICK TPH1_CHICK]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e2/3e2t_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e2t ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Tryptophan hydroxylase (TPH) is a mononuclear non-heme iron enzyme, which catalyzes the reaction between tryptophan, O 2, and tetrahydrobiopterin (BH 4) to produce 5-hydroxytryptophan and 4a-hydroxytetrahydrobiopterin. This is the first and rate-limiting step in the biosynthesis of the neurotransmitter and hormone serotonin (5-hydroxytryptamine). We have determined the 1.9 A resolution crystal structure of the catalytic domain (Delta1-100/Delta415-445) of chicken TPH isoform 1 (TPH1) in complex with the tryptophan substrate and an iron-bound imidazole. This is the first structure of any aromatic amino acid hydroxylase with bound natural amino acid substrate. The iron coordination can be described as distorted trigonal bipyramidal coordination with His273, His278, and Glu318 (partially bidentate) and one imidazole as ligands. The tryptophan stacks against Pro269 with a distance of 3.9 A between the iron and the tryptophan Czeta3 atom that is hydroxylated. The binding of tryptophan and maybe the imidazole has caused the structural changes in the catalytic domain compared to the structure of the human TPH1 without tryptophan. The structure of chicken TPH1 is more compact, and the loops of residues Leu124-Asp139 and Ile367-Thr369 close around the active site. Similar structural changes are seen in the catalytic domain of phenylalanine hydroxylase (PAH) upon binding of substrate analogues norleucine and thienylalanine to the PAH.BH 4 complex. In fact, the chicken TPH1.Trp.imidazole structure resembles the PAH.BH 4.thienylalanine structure more (root-mean-square deviation for Calpha atoms of 0.90 A) than the human TPH1 structure (root-mean-square deviation of 1.47 A).
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===The catalytic domain of chicken tryptophan hydroxylase 1 with bound tryptophan===
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Crystal Structure of Tryptophan Hydroxylase with Bound Amino Acid Substrate.,Windahl MS, Petersen CR, Christensen HE, Harris P Biochemistry. 2008 Oct 21. PMID:18937498<ref>PMID:18937498</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3e2t" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_18937498}}, adds the Publication Abstract to the page
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*[[Hydroxylases 3D structures|Hydroxylases 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 18937498 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_18937498}}
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__TOC__
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</StructureSection>
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==About this Structure==
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3E2T is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E2T OCA].
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==Reference==
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<ref group="xtra">PMID:18937498</ref><references group="xtra"/>
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<ref group="xtra">PMID: 18055219</ref><references group="xtra"/>
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[[Category: Gallus gallus]]
[[Category: Gallus gallus]]
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[[Category: Tryptophan 5-monooxygenase]]
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[[Category: Large Structures]]
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[[Category: Aromatic amino acid hydroxylase]]
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[[Category: Christensen HEC]]
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[[Category: tryptophan binding]]
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[[Category: Harris P]]
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[[Category: Iron]]
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[[Category: Petersen CR]]
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[[Category: Metal-binding]]
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[[Category: Windahl MS]]
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[[Category: Monooxygenase]]
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[[Category: Oxidoreductase]]
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[[Category: Phosphoprotein]]
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[[Category: Serotonin biosynthesis]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 05:15:45 2009''
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Current revision

The catalytic domain of chicken tryptophan hydroxylase 1 with bound tryptophan

PDB ID 3e2t

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Proteopedia Page Contributors and Editors (what is this?)

Michael Skovbo Windahl, OCA, David Canner, Eran Hodis

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