2pas
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2pas" size="450" color="white" frame="true" align="right" spinBox="true" caption="2pas" /> '''COMPARISON BETWEEN THE CRYSTAL AND THE SOLUT...) |
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| - | [[Image:2pas.jpg|left|200px]]<br /><applet load="2pas" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2pas" /> | ||
| - | '''COMPARISON BETWEEN THE CRYSTAL AND THE SOLUTION STRUCTURES OF THE EF HAND PARVALBUMIN'''<br /> | ||
| - | == | + | ==COMPARISON BETWEEN THE CRYSTAL AND THE SOLUTION STRUCTURES OF THE EF HAND PARVALBUMIN== |
| - | + | <StructureSection load='2pas' size='340' side='right'caption='[[2pas]]' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[2pas]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Esox_lucius Esox lucius]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PAS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PAS FirstGlance]. <br> |
| - | [ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 9 models</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pas FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pas OCA], [https://pdbe.org/2pas PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pas RCSB], [https://www.ebi.ac.uk/pdbsum/2pas PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pas ProSAT]</span></td></tr> |
| - | [ | + | </table> |
| - | [[ | + | == Function == |
| - | [ | + | [https://www.uniprot.org/uniprot/PRVA_ESOLU PRVA_ESOLU] In muscle, parvalbumin is thought to be involved in relaxation after contraction. It binds two calcium ions. |
| - | [[ | + | == Evolutionary Conservation == |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pa/2pas_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pas ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Parvalbumin|Parvalbumin]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Esox lucius]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Baldellon C]] | ||
| + | [[Category: Cave A]] | ||
| + | [[Category: Etienne G]] | ||
| + | [[Category: Padilla A]] | ||
| + | [[Category: Parello J]] | ||
Current revision
COMPARISON BETWEEN THE CRYSTAL AND THE SOLUTION STRUCTURES OF THE EF HAND PARVALBUMIN
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