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3gd5

From Proteopedia

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{{Seed}}
 
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[[Image:3gd5.jpg|left|200px]]
 
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==Crystal structure of ornithine carbamoyltransferase from Gloeobacter violaceus==
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The line below this paragraph, containing "STRUCTURE_3gd5", creates the "Structure Box" on the page.
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<StructureSection load='3gd5' size='340' side='right'caption='[[3gd5]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3gd5]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Gloeobacter_violaceus_PCC_7421 Gloeobacter violaceus PCC 7421]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GD5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GD5 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gd5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gd5 OCA], [https://pdbe.org/3gd5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gd5 RCSB], [https://www.ebi.ac.uk/pdbsum/3gd5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gd5 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3gd5 TOPSAN]</span></td></tr>
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{{STRUCTURE_3gd5| PDB=3gd5 | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/OTC_GLOVI OTC_GLOVI] Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gd/3gd5_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gd5 ConSurf].
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<div style="clear:both"></div>
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===Crystal structure of ornithine carbamoyltransferase from Gloeobacter violaceus===
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==See Also==
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*[[Ornithine carbamoyltransferase 3D structures|Ornithine carbamoyltransferase 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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3GD5 is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Gloeobacter_violaceus_pcc_7421 Gloeobacter violaceus pcc 7421]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GD5 OCA].
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[[Category: Gloeobacter violaceus PCC 7421]]
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[[Category: Gloeobacter violaceus pcc 7421]]
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[[Category: Large Structures]]
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[[Category: Ornithine carbamoyltransferase]]
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[[Category: Almo SC]]
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[[Category: Almo, S C.]]
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[[Category: Burley SK]]
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[[Category: Burley, S K.]]
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[[Category: Fedorov AA]]
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[[Category: Fedorov, A A.]]
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[[Category: Fedorov EV]]
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[[Category: Fedorov, E V.]]
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[[Category: Ramagopal UA]]
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[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
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[[Category: Sauder JM]]
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[[Category: Ramagopal, U A.]]
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[[Category: Toro R]]
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[[Category: Sauder, J M.]]
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[[Category: Toro, R.]]
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[[Category: Amino-acid biosynthesis]]
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[[Category: Arginine biosynthesis]]
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[[Category: Cytoplasm]]
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[[Category: New york sgx research center for structural genomic]]
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[[Category: Nysgxrc]]
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[[Category: Operon]]
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[[Category: Ornithine carbamoyltransferase]]
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[[Category: Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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[[Category: Target 9454p]]
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[[Category: Transferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 15 10:32:55 2009''
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Current revision

Crystal structure of ornithine carbamoyltransferase from Gloeobacter violaceus

PDB ID 3gd5

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