This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3gpv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: {{Seed}} 200px <!-- The line below this paragraph, containing "STRUCTURE_3gpv", creates the "Structure Box" on the page. You may change the PDB parameter (which se...)
Current revision (07:51, 16 March 2022) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3gpv.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of a transcriptional regulator, MerR family from Bacillus thuringiensis==
-
The line below this paragraph, containing "STRUCTURE_3gpv", creates the "Structure Box" on the page.
+
<StructureSection load='3gpv' size='340' side='right'caption='[[3gpv]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GPV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GPV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gpv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gpv OCA], [https://pdbe.org/3gpv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gpv RCSB], [https://www.ebi.ac.uk/pdbsum/3gpv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gpv ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3gpv TOPSAN]</span></td></tr>
-
-->
+
</table>
-
{{STRUCTURE_3gpv| PDB=3gpv | SCENE= }}
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gp/3gpv_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gpv ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of a transcriptional regulator, MerR family from Bacillus thuringiensis===
+
==See Also==
-
 
+
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3GPV is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacillus_thuringiensis_serovar_konkukian Bacillus thuringiensis serovar konkukian]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GPV OCA].
+
[[Category: Large Structures]]
-
[[Category: Bacillus thuringiensis serovar konkukian]]
+
[[Category: Burley SK]]
-
[[Category: Burley, S K.]]
+
[[Category: Kumaran D]]
-
[[Category: Kumaran, D.]]
+
[[Category: Palani K]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
[[Category: Swaminathan S]]
-
[[Category: Palani, K.]]
+
-
[[Category: Swaminathan, S.]]
+
-
[[Category: 11183m]]
+
-
[[Category: Crystal structure]]
+
-
[[Category: Dna-binding]]
+
-
[[Category: Merr family]]
+
-
[[Category: New york sgx research center for structural genomic]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Transcription regulator]]
+
-
[[Category: Transcriptional regulator]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 15 10:34:53 2009''
+

Current revision

Crystal structure of a transcriptional regulator, MerR family from Bacillus thuringiensis

PDB ID 3gpv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools