3gvi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: {{Seed}} 200px <!-- The line below this paragraph, containing "STRUCTURE_3gvi", creates the "Structure Box" on the page. You may change the PDB parameter (which se...)
Current revision (07:13, 6 September 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3gvi.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of Lactate/malate dehydrogenase from Brucella melitensis in complex with ADP==
-
The line below this paragraph, containing "STRUCTURE_3gvi", creates the "Structure Box" on the page.
+
<StructureSection load='3gvi' size='340' side='right'caption='[[3gvi]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3gvi]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Brucella_abortus_2308 Brucella abortus 2308]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GVI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GVI FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr>
-
{{STRUCTURE_3gvi| PDB=3gvi | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gvi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gvi OCA], [https://pdbe.org/3gvi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gvi RCSB], [https://www.ebi.ac.uk/pdbsum/3gvi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gvi ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MDH_BRUA2 MDH_BRUA2] Catalyzes the reversible oxidation of malate to oxaloacetate.[HAMAP-Rule:MF_00487]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gv/3gvi_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gvi ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of Lactate/malate dehydrogenase from Brucella melitensis in complex with ADP===
+
==See Also==
-
 
+
*[[Malate Dehydrogenase 3D structures|Malate Dehydrogenase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3GVI is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Brucella_melitensis_biovar_abortus_2308 Brucella melitensis biovar abortus 2308]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GVI OCA].
+
[[Category: Brucella abortus 2308]]
-
[[Category: Brucella melitensis biovar abortus 2308]]
+
[[Category: Large Structures]]
-
[[Category: Malate dehydrogenase]]
+
-
[[Category: SSGCID, Seattle Structural Genomics Center for Infectious Disease.]]
+
-
[[Category: Brucella melitensis]]
+
-
[[Category: Lactate/malate dehydrogenase]]
+
-
[[Category: Nad]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Seattle structural genomics center for infectious disease]]
+
-
[[Category: Ssgcid]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Tricarboxylic acid cycle]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 15 10:38:27 2009''
+

Current revision

Crystal structure of Lactate/malate dehydrogenase from Brucella melitensis in complex with ADP

PDB ID 3gvi

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3gvi"
Personal tools